Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04726 ATGCATGGGAAAAAAGATCAAGAACATGTAAGGAAAGGTCCATGGAAAACAGAAGAAGATGAAGTGTTACTTCATCATGTGAAGAAGTATGGTCCAAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTCTTCAAAGAACTGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAACTTCGACCAAACCTCAAAAATGGGTGCAAGTTTACAATAGAGGAAGAGAGGGTTGTGATAGAATTGCAGGAACAATTTGGGAACAAATGGGCTAAGATTGCTTCCTATTTACCAGGAAGAACAGACAATGATGTCAAAAATTTCTGGAGCAGTAGACAAAAGAGATTGGCTAGGCTTCTCAAAACATCATCATCAACAACCTCAAAGTCACACAAAAACAAAGCCAAAGTTTCTTCCCATGTTCCATCTTACGAGGTACCTTATAAGTTCAGTTCTTCATCAGAGGGAGAAACATCATCAAAGCCTCGATCACATTCATTACCATGCATTGAGGATTCTGATCAAGTTATCAAAATGGTTCCATTGTTGGATCTTAAAAAATCCGAGCAACCTAGTTTCGATGCAAATTACGTTGAACAAGAGTTCACCCCTTTTGATCAGAGCTATAAAAGCACTGAACACATTGCATTTCCTCAGATTCCAGAACTCCAAACTGATTTTACTTTTCCAATGGAAAGAGTTGATGAACACAATTTATTTGATGTGTTTGGTCCCTTGGAAACATCTGAGTATGGAATGGTTCCTTTTTTTGAGCCATCAGGAAGTTGCAAAATTGATGATTTCTTTGATGATTTTCCAGGGGACATGTTTGATCACATTGAGCCACATTCAAGTCATTCTAAGCTCTGA 864 0.3866 MHGKKDQEHVRKGPWKTEEDEVLLHHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFTIEEERVVIELQEQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRLARLLKTSSSTTSKSHKNKAKVSSHVPSYEVPYKFSSSSEGETSSKPRSHSLPCIEDSDQVIKMVPLLDLKKSEQPSFDANYVEQEFTPFDQSYKSTEHIAFPQIPELQTDFTFPMERVDEHNLFDVFGPLETSEYGMVPFFEPSGSCKIDDFFDDFPGDMFDHIEPHSSHSKL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04726 287 Gene3D - 67 139 - -
Mepo1g04726 287 Gene3D - 4 65 - -
Mepo1g04726 287 SMART sant 65 113 IPR001005 -
Mepo1g04726 287 SMART sant 11 61 IPR001005 -
Mepo1g04726 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Mepo1g04726 287 FunFam MYB transcription factor 12 64 - -
Mepo1g04726 287 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mepo1g04726 287 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Mepo1g04726 287 FunFam Transcription factor GAMYB 67 137 - -
Mepo1g04726 287 MobiDBLite consensus disorder prediction 118 138 - -
Mepo1g04726 287 CDD SANT 68 107 IPR001005 -
Mepo1g04726 287 CDD SANT 14 59 IPR001005 -
Mepo1g04726 287 PANTHER TRANSCRIPTION FACTOR DUO1 4 285 - -
Mepo1g04726 287 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
Mepo1g04726 287 Pfam Myb-like DNA-binding domain 68 107 IPR001005 -
Mepo1g04726 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 63 IPR017930 -
Mepo1g04726 287 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04726 Mepo-Chr1 55291909 55293755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04726 1 280 MYB Transcription Factor Family AT3G60460 49.342 1.45e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g04726 Myb_DNA-binding 1.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04726 K09422 - gmx:100818656 374.015