Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04719 ATGAAAGTGATGTTGTTGAACAACCTTAAACGACATTTCTGTTCCAACATCGTCACAACAACAACCTTAAACTCCTCAAAAAAGAAAATCCCTTGTCGCTACAAGAAGCTTGCAGTGTTACAAGCTCAAAAAGCACTCACTGAATATCTCCATTCCACAAGATCCATCCCTTATGCTTATGCAGATCAAATTTCCAAAAACTCAGTTCACTCTCTCTCTAATATCATTTCAAAATTGGGTTCTTTTTCACCAAAAAACTTGGATTCTTTCACCAAAAAAGTTGAAAAGTTTTTAAGGTACAACCCCATCAATGAGTTTGAGTTTTTCTTTGAAAGCATTGGAATTCATCACACACATGTTTCTAGTTTGTTGCCCAACGATAAATTCTTTTTTTGTGACGATGAATCACTTCTTGATTCTGCTTGTGTGCTTTGTGAATTTGGGTTTCCTTGGGATAAGCTTGGTGTGATTTATACGGAGAGTGGTTTTATGTTTAGGAAGAGTGGTACTGAGATAAAGGGTAGGCTTTGTTTGTTGAAAAGATATGGTTTTTGTAATGTGCAAATTGTTGCGATTTGTTTGACTTTTCCTTTTGTTTTTGGTGTGGAGGAAGGGGAATTTGTGGATGATGAGGTTGATAGGTTGCTTTCTGATTTGAGGTTGGTGTTTTTGGATTATGATCTGGGAGGGTGTGTTGAAGGGAATGTGGATGTTTGGTATGATGTTTGTAGGAAAATTAAAGTGTTTTATGATTTGAGTGATGGTAAAGGGAAGATAGGTGAACTCATTGGAAGGAATAAACATTTGATTCTTGAGTATGGAGAAGAGGAGTTGATTGAAAAGGTTGAGTTTTTCTGTAAATTCAGTGTCGAGAAGGAGGAAATAGCTCGGTTGATTCTACAAGGTTTGGAGTTGTTGAGTCTCAATTTGGAAGTGACGATTAACGTGTTGAAGCTGTTGAAACACATTGGAATGGATTCTAAAGGTCTTGGTGATGTGAAGAAGAACTATGCTCATGCGTTGGGAACAATAAAAATGGCGAATCTTCCCAATGTGATGAGGGCTATGGGTTTACGTGAATGGTTTTTCGATAAAATCAAGGATGGGAATCATAAGCTTTTAATAGATTTTATCACAAGCTATCCCAATGAAGAGCATGATAAAGGTTATCAAAGTGGTTTTAAGGCAATTCATGATGCAAGGTTACCGTCTCACAATATGAGTAAATTAAATTTCATGCATACTATTGGCTTTGGTGAAAATGCTATGACCATGGATATCTTAAATCACATGCATGGAACAAGTGAAGAGTTACAGAAAAGATTTGATTGCCTTCTACATTTAGGGATTGAATTCTCAAAACTGTGTAAGATAATCACAAAGCTACCAAAGATTCTAAGTCAAAATCCTGAAACTCTAGAGAAAAAGATTAATTTCCTATGTCAGGATATGGGACACTCCTTAGAGCTTTTGGACACTTTTCCGGCGTTTATATGTTTTGACTTAGAGAACCGAATTAAGCCGAGGTTCAGATTCCATATGTGGGCTTTAGAAAAGGGATTGTATTCAAAAAACTATTCCATTGCAAGCATGGTTGCGACTAGTGACAAGGGTTTTGTTGGCCGTGTTTTTAAAATTCACCCGGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCCCAATAAATTTCGAGCTTCATGA 1701 0.3674 MKVMLLNNLKRHFCSNIVTTTTLNSSKKKIPCRYKKLAVLQAQKALTEYLHSTRSIPYAYADQISKNSVHSLSNIISKLGSFSPKNLDSFTKKVEKFLRYNPINEFEFFFESIGIHHTHVSSLLPNDKFFFCDDESLLDSACVLCEFGFPWDKLGVIYTESGFMFRKSGTEIKGRLCLLKRYGFCNVQIVAICLTFPFVFGVEEGEFVDDEVDRLLSDLRLVFLDYDLGGCVEGNVDVWYDVCRKIKVFYDLSDGKGKIGELIGRNKHLILEYGEEELIEKVEFFCKFSVEKEEIARLILQGLELLSLNLEVTINVLKLLKHIGMDSKGLGDVKKNYAHALGTIKMANLPNVMRAMGLREWFFDKIKDGNHKLLIDFITSYPNEEHDKGYQSGFKAIHDARLPSHNMSKLNFMHTIGFGENAMTMDILNHMHGTSEELQKRFDCLLHLGIEFSKLCKIITKLPKILSQNPETLEKKINFLCQDMGHSLELLDTFPAFICFDLENRIKPRFRFHMWALEKGLYSKNYSIASMVATSDKGFVGRVFKIHPAAPKHWFEQFYPNKFRAS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04719 566 Gene3D Transcription termination factor 3, mitochondrial 68 225 IPR038538 -
Mepo1g04719 566 Gene3D Transcription termination factor 3, mitochondrial 236 365 IPR038538 -
Mepo1g04719 566 Gene3D Transcription termination factor 3, mitochondrial 397 558 IPR038538 -
Mepo1g04719 566 PANTHER CGI-12 PROTEIN-RELATED 89 546 IPR003690 GO:0003690|GO:0006355
Mepo1g04719 566 Pfam mTERF 435 539 IPR003690 GO:0003690|GO:0006355
Mepo1g04719 566 SMART mt_12 488 520 IPR003690 GO:0003690|GO:0006355
Mepo1g04719 566 SMART mt_12 296 326 IPR003690 GO:0003690|GO:0006355
Mepo1g04719 566 SMART mt_12 261 291 IPR003690 GO:0003690|GO:0006355
Mepo1g04719 566 SMART mt_12 456 487 IPR003690 GO:0003690|GO:0006355
Mepo1g04719 566 FunFam Transcription termination factor MTEF18, mitochondrial 394 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04719 Mepo-Chr1 55175060 55182887 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo1g04719 mTERF 2.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04719 - - gmx:100812245 672.544