Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04718 ATGGGTGAGAAAGATGATGAATTTAGTTTGGGTTTAAGCTTGAGTTTAGGATTTGGAGAATATGCAAATAACAACAACCAAACTCCTTTGAAGGTGAGTCACATGCACAAGCCTCCTCAAACGGTTACAAACCAAAGGGTTTCCTTCAATAACTTGTTCCATTTTCATGATCTAAGCACAGAAACGAGGTCGTTTCTCCGCGGAATAGACGGCAACACTCCCCTACCATCTACGGCGGCGACGGCCGCCGCATTTGACGACGAGAACGGAGTTTCATCACCGAACAGCACTGTGTCAAGCATCAGCGGAAAGAGAAGCGAACGAGAAGGAAACGTAGAAGAAAACGACGCCGTCGAAAGGGGTTCATGTTCTCGTGGCGGCGGAAGTGACGATGATGACGGCGGAGGTTGCGGCGGCGACGGTGATTCGTCAAGGAAGAAGCTGAGGTTGTCGAAGGAACAGTCAATGTTGTTGGAAGAAACTTTCAAGGAGCATAATACTCTGAATCCGAAACAAAAGCAAGCATTGGCAAAGCAGTTGAATCTGAAGCCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAAACTGAAGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACTCTAACTGATGAGAATAGGAGGTTGCAAAAGGAAGTGCAAGAGCTTAGGGCATTGAAGTTATCTCCACAACTCTACATGCAAATGAACCCTCCCACCACTCTTACAATGTGCCCTTCGTGCGAGCGTGTCGCCGTGTCATCCACATCCTCCTCATCAGCAGCTGCTGCTCCTCCCTCTGCTTCAGCCAACCCGTCCGGCCCAAGTGTTCAACGGCCAACACCTGTCAACCCTTGGGCGGCAATGTCTATCCAAAACCGTTCCCGACCATGA 918 0.4891 MGEKDDEFSLGLSLSLGFGEYANNNNQTPLKVSHMHKPPQTVTNQRVSFNNLFHFHDLSTETRSFLRGIDGNTPLPSTAATAAAFDDENGVSSPNSTVSSISGKRSEREGNVEENDAVERGSCSRGGGSDDDDGGGCGGDGDSSRKKLRLSKEQSMLLEETFKEHNTLNPKQKQALAKQLNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLSPQLYMQMNPPTTLTMCPSCERVAVSSTSSSSAAAAPPSASANPSGPSVQRPTPVNPWAAMSIQNRSRP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04718 305 FunFam Homeobox-leucine zipper protein 18 130 206 - -
Mepo1g04718 305 SMART halz 201 244 IPR003106 GO:0006355|GO:0043565
Mepo1g04718 305 Pfam Homeobox associated leucine zipper 201 235 IPR003106 GO:0006355|GO:0043565
Mepo1g04718 305 SMART HOX_1 143 205 IPR001356 GO:0003677
Mepo1g04718 305 Gene3D - 137 206 - -
Mepo1g04718 305 MobiDBLite consensus disorder prediction 263 285 - -
Mepo1g04718 305 Pfam Homeodomain 145 199 IPR001356 GO:0003677
Mepo1g04718 305 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 279 - -
Mepo1g04718 305 MobiDBLite consensus disorder prediction 263 305 - -
Mepo1g04718 305 SUPERFAMILY Homeodomain-like 129 202 IPR009057 -
Mepo1g04718 305 CDD homeodomain 145 202 IPR001356 GO:0003677
Mepo1g04718 305 MobiDBLite consensus disorder prediction 106 120 - -
Mepo1g04718 305 Pfam HD-ZIP protein N terminus 1 109 IPR006712 GO:0005634
Mepo1g04718 305 ProSitePatterns 'Homeobox' domain signature. 176 199 IPR017970 GO:0000981|GO:0006355
Mepo1g04718 305 MobiDBLite consensus disorder prediction 88 105 - -
Mepo1g04718 305 ProSiteProfiles 'Homeobox' domain profile. 141 201 IPR001356 GO:0003677
Mepo1g04718 305 MobiDBLite consensus disorder prediction 84 147 - -
Mepo1g04718 305 MobiDBLite consensus disorder prediction 291 305 - -
Mepo1g04718 305 Coils Coil 214 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04718 Mepo-Chr1 55139221 55141949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04718 16 302 Homeobox Transcription Factor Family AT3G60390 61.074 3.95e-105 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo1g04718 HD-ZIP_N 5.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04718 K09338 - gmx:100810641 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04718 1 55139221 55141949 Mepo1g04718 1 55139221 55141949 ECH