Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04706 ATGGTGAAACTCGAATCTACAACTCTTGAATCTGACCTTGCTTTTCTAGAATCAATTCAAAGCTACCTCCTCGACGACCACCATGACTTCAACCCTCTCTCAGCCTTCACCACCGCATCTCATGGCAGTAGCGACTCAAACTCAACGTCAAAAACACTTCATGGTGACGCCTCCCACGCGCTTCCTGCTTCGCGTGAATCACACGCGCCACCTTGTTGGCAGAGATACAAAGGAGTGAGGCGGAGGCCGTGGGGAAAGTTTGCAGCTGAGGTTAGAGATCCGAATAAAAACGGCGCGAGGGTGTGGCTAGGGACTTATGAGTCGGCTCAAGATGCTGCTTTGGCTTATGACCGAGCCGCTTTTAAGATGCGCGGCTCGAAGGCTAAGTTGAACTTTCCGCATTTGATTGGCTCCGATGTCTCGGAGTCGATGGTAGTCATGGTTAAGCGGCGTGCAACGGAGCTTTGTTCTTCGTCGAGGGTGGTTTTGGAGCCGAAAAGGAAAATCAGCCGAGTCAGTGGCTATGATTCTTTATTATGA 540 0.5074 MVKLESTTLESDLAFLESIQSYLLDDHHDFNPLSAFTTASHGSSDSNSTSKTLHGDASHALPASRESHAPPCWQRYKGVRRRPWGKFAAEVRDPNKNGARVWLGTYESAQDAALAYDRAAFKMRGSKAKLNFPHLIGSDVSESMVVMVKRRATELCSSSRVVLEPKRKISRVSGYDSLL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04706 179 PRINTS Ethylene responsive element binding protein signature 115 135 IPR001471 GO:0003700|GO:0006355
Mepo1g04706 179 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mepo1g04706 179 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Mepo1g04706 179 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Mepo1g04706 179 MobiDBLite consensus disorder prediction 38 55 - -
Mepo1g04706 179 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Mepo1g04706 179 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Mepo1g04706 179 MobiDBLite consensus disorder prediction 38 69 - -
Mepo1g04706 179 FunFam Ethylene-responsive transcription factor 2 74 134 - -
Mepo1g04706 179 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Mepo1g04706 179 PANTHER DNA-BINDING DOMAIN 50 147 IPR044808 GO:0003700|GO:0009873
Mepo1g04706 179 CDD AP2 74 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04706 Mepo-Chr1 55014481 55015285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04706 67 179 AP2-EREBP Transcription Factor Family AT2G44840 60.526 1.67e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g04706 AP2 5.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04706 K09286 - gmx:100527194 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04706 1 55014481 55015285 Mepo1g04706 1 55014481 55015285 ECH
Mepo1g04706 1 55014481 55015285 Mepo3g02356 3 33352748 33353549 PCT