Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04705 ATGGATGCTTCAATATTAATGTCTTGTGATTTTAATCCTTTATTTCAACACCATTTGTTTGATCTTGAACTTGAACACCAACACAATTTCCATTCTCTCATCATGAATACTAATTCCACCCACCAAACCTTAGATCCATCCACGCACGATTCATTTCCTAGTCCAACATTGGATGTTAACAACACTGCCAATGTTAATGACGCCGCGTGTAAAAATGGATCATCAACGATGATCCATAAACCTCACGCGTCTGTACCAGAATGGAAGCGGTATAGAGGCGTGAGGCGAAGGCCATGGGGGAAATTTGCTGCGGAGATAAGGGATCCAAAGAAGAAAGGAGCTAGAGTTTGGCTTGGAACATATGAAACTGAAGAAGAAGCTGGGTTGGCTTACGATAGAGCTGCTTTCAAGATCCGTGGTAGAAAAGCCAAGCTCAATTTTCCCCACCTCATTGGCTCTGAAGAGCCAACAAGTGTGGTGGTAGCTTCGAAGAACAACTTACCGGAGGGTAATTATGAGCCTTCGGGAGGGATAATAAAGAAGAAGAAGAAGAACTTAGTTGATGTATTGAATAGATTAGCCAAGAATAGATGGCAATTAAGTGCAGGGTTTGAAATGATTTAG 624 0.4183 MDASILMSCDFNPLFQHHLFDLELEHQHNFHSLIMNTNSTHQTLDPSTHDSFPSPTLDVNNTANVNDAACKNGSSTMIHKPHASVPEWKRYRGVRRRPWGKFAAEIRDPKKKGARVWLGTYETEEEAGLAYDRAAFKIRGRKAKLNFPHLIGSEEPTSVVVASKNNLPEGNYEPSGGIIKKKKKNLVDVLNRLAKNRWQLSAGFEMI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04705 207 Pfam AP2 domain 90 140 IPR001471 GO:0003700|GO:0006355
Mepo1g04705 207 SUPERFAMILY DNA-binding domain 90 149 IPR016177 GO:0003677
Mepo1g04705 207 ProSiteProfiles AP2/ERF domain profile. 90 148 IPR001471 GO:0003700|GO:0006355
Mepo1g04705 207 CDD AP2 89 150 IPR001471 GO:0003700|GO:0006355
Mepo1g04705 207 SMART rav1_2 90 154 IPR001471 GO:0003700|GO:0006355
Mepo1g04705 207 FunFam Ethylene-responsive transcription factor 2 89 149 - -
Mepo1g04705 207 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Mepo1g04705 207 PRINTS Ethylene responsive element binding protein signature 130 150 IPR001471 GO:0003700|GO:0006355
Mepo1g04705 207 Gene3D AP2/ERF domain 89 149 IPR036955 GO:0003700|GO:0006355
Mepo1g04705 207 PANTHER DNA-BINDING DOMAIN 56 161 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04705 Mepo-Chr1 55010510 55011272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04705 82 169 AP2-EREBP Transcription Factor Family AT2G44840 68.182 6.09e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g04705 AP2 4.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04705 K09286 - gmx:100527194 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04705 1 55010510 55011272 Mepo1g04705 1 55010510 55011272 ECH
Mepo1g04705 1 55010510 55011272 Mepo3g02355 3 33345545 33346309 PCT