Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04704 ATGAACACTAATGCTTGGAACACCAATGTTAATGCCCTAGATCATTTTGAACCTACCACAACGACGCTGTTTAATGACACTTCAGCTCCGACAGCCCCGGTACCAATTTCCCAGAGTCCAAGTTTCCGGAGCATTTTCTTTGGGGAGAATTGGGCAGAGCTGCCGCTGAAGGAGGATGACACCGAAGACATGGTCATCTACGGAGCTTTGCGCGAAGCTGCAGCTACCACGGGCTGGTTCCCGGCTAGCAACAACGTGGTGAACAATGTTGATATGGCCGTGAAAATAGAAGATCAAGGTCAAAGCAGTGGCACTTCATTGGCGAGTGTTGCTCACGTGCAACACGCGCCAACGACTAGTAAAAGGTTAGGGTACCGTGGAGTTAGGAGAAGGCCTTGGGGAAAGTATGCGGCTGAGATAAGGGATCCTAAGAGAAATGGTGCTAGGGTGTGGCTTGGGACTTATGAAACAGCTGAGAATGCAGCTTTGGCTTATGATCGAGCTGCGTTTAAAATACGTGGCTCGAAAGCTAAGCTGAATTTTCCTCATTTGATCGACTCAGATTACAATGGGTCGGTTAAGTTCACACGGAAAGAGCGCTAG 603 0.4892 MNTNAWNTNVNALDHFEPTTTTLFNDTSAPTAPVPISQSPSFRSIFFGENWAELPLKEDDTEDMVIYGALREAAATTGWFPASNNVVNNVDMAVKIEDQGQSSGTSLASVAHVQHAPTTSKRLGYRGVRRRPWGKYAAEIRDPKRNGARVWLGTYETAENAALAYDRAAFKIRGSKAKLNFPHLIDSDYNGSVKFTRKER 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04704 200 SUPERFAMILY DNA-binding domain 124 183 IPR016177 GO:0003677
Mepo1g04704 200 FunFam Ethylene-responsive transcription factor 2 123 183 - -
Mepo1g04704 200 Gene3D AP2/ERF domain 124 183 IPR036955 GO:0003700|GO:0006355
Mepo1g04704 200 PRINTS Ethylene responsive element binding protein signature 164 184 IPR001471 GO:0003700|GO:0006355
Mepo1g04704 200 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Mepo1g04704 200 PANTHER DNA-BINDING DOMAIN 102 183 IPR044808 GO:0003700|GO:0009873
Mepo1g04704 200 CDD AP2 125 184 IPR001471 GO:0003700|GO:0006355
Mepo1g04704 200 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Mepo1g04704 200 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
Mepo1g04704 200 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04704 Mepo-Chr1 54993547 54994149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04704 38 195 AP2-EREBP Transcription Factor Family AT2G44840 53.165 1.25e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g04704 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04704 K09286 - gmx:100793366 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04704 1 54993547 54994149 Mepo1g04704 1 54993547 54994149 ECH