Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04643 ATGAAGTGCTTTTCCTATTTCAAATATAAACACAAAGGTAGGGGTCAAAGATCAGCACCTGAGCTAGAAGAGCAAGAAAAACATCAGTTTTCAGGATTTGAAAGAGTTACAAAGTCTTCTTGTTCATCTACCTCTTCACCTAGGGGTATACCAAAACTTTATGAGGAGAAGGGCCATAATTTGAGGGTTTTTTCTTTCTCGGAGCTCAGCCGTGCGACAAGTGACTTCAATAGGCTTCTTAAGATAGGAGAAGGTGGATTTGGAAGTGTATTTAAAGGTTCAATTAAACCTGCTGGTGGAAATGGTGATCCTATCTTAGTTGCCATCAAAAGACTTAACAAGGATGCATTGCAGGGCCATAAGCAATGGTTAACTGAAGTTCAGTTTCTTGGTGTTGTGGATCATCCAAACCTTGTTAAGCTTATTGGATACTGTGCTGTGGATGGTGAGAGAGGGATTCAAAGATTACTTGTGTACGAATACATGCCGAATCGAAGCTTAGAAGCTCATCTGTTCAACAAATCTTATGATCCTGTTCCTTGGAAAACAAGACTTGAAATTGCGCTCGGAGCAGCTCAAGGCTTATCTTATCTGCATGAAGAATTAGAAGTCCAGATAATATATCGTGACTTTAAATGTTCAAATGTCTTGCTGGATGAAAATTTTAAACCAAAACTTTCTGATTTCGGACTCGCTAGGGAGGGACCGGAAGCTGGGGATACCCATGTTTCAACTGCTGTAATGGGGACACATGGTTATGCCGCTCCAGATTACATTGAGACAGGCCATCTCACCGCCAAGAGTGATGTGTGGAGTTTCGGTGTTGTGCTATATGAAATGCTTACCGGTAGGCGTTCATTGACAAGAAACCGGCCAAAAACGGAACAGAAACTATTAGAGTGGGTGAAGAACTACCCTCCTGATAGCAAAAAGTTTGACATGATAATGGATCCAAGACTTGAAGGAAAATATTCCATTAACGCGGCGCGAAAACTCGCCAAACTTGCGGATCATTGCCTGCGTAAGAGCTCGAAAGATAGGCCGACAATGAGTCAGGTAGTAGAGAGATTGAAGGAAATAATCCAAGCGTCTGATGAAGAACAAGAAGAACATCATGAGCCAAATGAGATAGACAGTGTTGAGGTATCTGAAAATGATTCATTTGAGCATCAAGAAGAGTCAAATTCATCAGGCTCTACGGAGTTATGGAGAAAGAGAATGGAGCATCTTGCAAAACTTGGTGAACATGTGGAGGGTGCTAATAGAAAAATGTTTATGATTCAACAGAGAGCCAATGTGTCTACATAG 1308 0.4136 MKCFSYFKYKHKGRGQRSAPELEEQEKHQFSGFERVTKSSCSSTSSPRGIPKLYEEKGHNLRVFSFSELSRATSDFNRLLKIGEGGFGSVFKGSIKPAGGNGDPILVAIKRLNKDALQGHKQWLTEVQFLGVVDHPNLVKLIGYCAVDGERGIQRLLVYEYMPNRSLEAHLFNKSYDPVPWKTRLEIALGAAQGLSYLHEELEVQIIYRDFKCSNVLLDENFKPKLSDFGLAREGPEAGDTHVSTAVMGTHGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLTRNRPKTEQKLLEWVKNYPPDSKKFDMIMDPRLEGKYSINAARKLAKLADHCLRKSSKDRPTMSQVVERLKEIIQASDEEQEEHHEPNEIDSVEVSENDSFEHQEESNSSGSTELWRKRMEHLAKLGEHVEGANRKMFMIQQRANVST 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04643 435 Gene3D Transferase(Phosphotransferase) domain 1 162 386 - -
Mepo1g04643 435 FunFam PTI1-like tyrosine-protein kinase 3 162 371 - -
Mepo1g04643 435 MobiDBLite consensus disorder prediction 363 402 - -
Mepo1g04643 435 PANTHER OS01G0588500 PROTEIN-RELATED 43 361 - -
Mepo1g04643 435 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Mepo1g04643 435 MobiDBLite consensus disorder prediction 15 49 - -
Mepo1g04643 435 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Mepo1g04643 435 CDD STKc_IRAK 82 360 - -
Mepo1g04643 435 MobiDBLite consensus disorder prediction 363 391 - -
Mepo1g04643 435 MobiDBLite consensus disorder prediction 34 49 - -
Mepo1g04643 435 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Mepo1g04643 435 Coils Coil 350 370 - -
Mepo1g04643 435 SUPERFAMILY Protein kinase-like (PK-like) 59 381 IPR011009 -
Mepo1g04643 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mepo1g04643 435 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04643 435 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04643 Mepo-Chr1 54234580 54239265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04643 1 403 Glycoside Hydrolase AT3G07070 40.909 6.72e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo1g04643 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04643 - - psat:127076679 779.63