Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04632 ATGGGTGATGACAAATCTCCCTCTTTGGATGAAGACAAGTTTCAACAAGAGAATATGCAACTATCATGTTTCTCTTTTGAGGGTGATAATTCTCAATCTTCAACCATACAATATTTTAACAATATTTTAGATAATGTTTGTGTCACCCCAACAATTCAAGAGAACATTCTCAAGAATAGCAATAGTTCCAACTCTCTTATTTCTCAAGAATATAATTGTCCTACTAATTCACAAAAATTAGCACCTTCTCAATACATTTTATCTTTTGAAAACTCAATTGTGAAACCTTCCCCTAATAGTGCCGCATGTTCTTCTTTTATGGTCCCAAAAACAACCTTGAACAACAATATTGTGAGTGAATTACCAAAGACAATTAAGAAAAGAACCAAGCATCTTAGAAGCTCTTCAGAGATACAAGATCACATTATGGCTGAGAGAAAAAGGAGACAAGTTCTTAGTGAGAGATTCATAGCACTATCTGCCACTATACCTGGATTGAAGAAGACTGATAAGGTCTACATACTTCAAGAAGCTATCAATTATGTGAAACAACTTCAAGAAAGGGTAAATGAACTAGAGAATCATACCAAAAGGAAAAGAGATTCAATAATATTCATCAAGAAATCTCAAGCTTGCATAGTAGACAAGGAAAAAAGTACTTCATGTGAAGAGAATTCTGATAATGATGACCATAGATATTATTCCAAGAGGGAACTACCTAGGGTTGAAGCAAGAGTCATAGACAAGGAAATTCTCATTGGAATCCAATGTGAGAAACAAAAGGATATTGTGGTCAGATTAATGGTTTTGCTTCAAAATCATCATCTATCTCTTGCTAGTAGCAGTGTCTTGCATTTTGGAAGTTCCACTCTAAAAGTTACAATCATTGCTCAGATGGATGATGAATACTGCATGAGCGTGAATGATCTGCTTAATAACCTGCGGCAAAATCTCATGGAATCACGTGACAATAATGATAATATTTCTTAG 990 0.3444 MGDDKSPSLDEDKFQQENMQLSCFSFEGDNSQSSTIQYFNNILDNVCVTPTIQENILKNSNSSNSLISQEYNCPTNSQKLAPSQYILSFENSIVKPSPNSAACSSFMVPKTTLNNNIVSELPKTIKKRTKHLRSSSEIQDHIMAERKRRQVLSERFIALSATIPGLKKTDKVYILQEAINYVKQLQERVNELENHTKRKRDSIIFIKKSQACIVDKEKSTSCEENSDNDDHRYYSKRELPRVEARVIDKEILIGIQCEKQKDIVVRLMVLLQNHHLSLASSSVLHFGSSTLKVTIIAQMDDEYCMSVNDLLNNLRQNLMESRDNNDNIS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04632 329 Coils Coil 311 329 - -
Mepo1g04632 329 Pfam Helix-loop-helix DNA-binding domain 140 186 IPR011598 GO:0046983
Mepo1g04632 329 Coils Coil 175 202 - -
Mepo1g04632 329 PANTHER BHLH TRANSCRIPTION FACTOR 10 320 - -
Mepo1g04632 329 SMART finulus 142 191 IPR011598 GO:0046983
Mepo1g04632 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Mepo1g04632 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 200 IPR036638 GO:0046983
Mepo1g04632 329 Gene3D - 135 207 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04632 Mepo-Chr1 54134161 54138754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04632 123 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.709 2.72e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g04632 HLH 7.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04632 - - tpra:123883331 389.808