Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04597 ATGGCTTTGGAGAACTTCTACAACATCTTATTTAGTGAAACAAAGCTGAGAAGTTTTTCATGGACTACATGGCAGCCATTAGTCTCACCATGCTTGTTGGAACATGTAACTTTACCTATAGAATTTGGCTTTCTTGTGATATTGTTAGTCCAACTCCTAAGAAATTGCATGAACAACATCACCAAGCAAAACAAGGTCTCAGGAGTGCATCCAAATTGCATAAAATTTGGTCTTCCTTACATGATAAGCTTAGCTTGCACCACTTTATTGTTGGCTATTCATGCTTTAATGCTAATATTGATGCTCAATCATGAGCCTCAATGTACTTCAAAACTTCAAACTTTTACATCAGAGATCATTCAAGTGTTATCATCTGCAACTATTCTAATAGCAATATGCAAGATGTCGAAAACAAATGCTAATTTCCACTGGATTGTAAGGATTTGGTGGTTTTTCAGTTTCCTTTTGAGCATTATCAGCACAGCCCTTCATGTCCATTTCAGTATAAAAAACAAGGGTGTTATTGGTATAAAGGAATATGCAGATTTCCTTGGTTTTATTGTTTCAACATGTCTGTTAGTTGTTTCAACAAGAGGGAAAACAGGAATAGTCATCATTGCAACAAATGGTAGCATATCTGAACCACTTTTGGAAGAGAAAAATGAGAAACATTCTTCTGAGTGTCTAAAAGAATCACCATATGGAAAAGCTACATTTTTTCAATTGATAAATTTCTCATGGCTCAATCCGTTGTTTGCGGTAGGGTATAAGAAACCTCTTCAATTGGATGATATTCCTAAACTTGACATCAAGGACTCTGCTGAATATCTAAATTGCGCATTTGATGAGAGTCTTAGACAAGTTAAGGAAAAAGATGGAACTACAAATCCATCTATCTACAAGGCAATCTATTTATTTGCTAGAAAGAAAGCAGCAATCAACGCGCTTTTCGCAATAATAAGCGCTTCAGCATCTTATGTTGGTCCATATTTGATCACTGACTTTGTGAATTTCCTCACCGAGAAAGACAGTCACGGACTAAAGACCGGATACCTTTTGTCGCTAGGTTTCTTATGTGCTAAAATGATTGAGGTCATAGCTCAAAGGCAATGGATTTTCGGTGCTCGGCAATTAGGCCTCCGCCTAAGGGCCGCATTGATATCACATGTATATAAGAAGGGCTTACATCTGTCAAGCCGATCGCGTCAAAGTCATTCTGGTGGTGAGATAATGAACTACATGAGTGTAGATGTGCAGAGGATTACGGATTTCGTTTGGTATGTAAATGTTATTTGGATGCTGCCGATACAAATTTCCTTAGCTGTTCTCATTTTGCAGACAAATCTTGGATTAGGTTCATTGGCTGCATTAGCTGCTACACTAGCAGTTATGACTTTGAACATACCTTTAACGAAAATACAGAAAAGATACCAAACCAAGATCATGGATGCAAAAGACAACAGAATGAAGACCACTTCAGAAATTCTCAAAAACATGAGGACTTTGAAACTTCAAGCATGGGATAGTGAGTTTTTCAAAAGGATAGAATCATTGAGAAGTGTTGAATATAGTTGGTTATCGAAGTCATTAAGACAACAGGCGTTTTCGGCTTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTTTGGACATGCATGTTCCTAGGGATTGAGCTGACAGCTGGAAGGGTCTTATCCGCATTTGCGACATTCCGAATGTTACAAGATCCTATCTTTAGTCTACCTGATCTACTCAATGTCATTGCTCAAGGAAAAGTTTCTGTCGATAGGATCGCTTCTTTTCTTAAGAAGGAAGAAATCCAACATGATGTAATTGAATATGTTTCTAAGGACAAAACAGAATTTGATGTAGTTGTTGAGAAAGGAAGATTCAGTTGGGATCCTGAGACAACAATTCCAACACTTGATGAAATTGAGTTGAAAGTTAAGAGAGGAATGAAGGTTGCAATTTGTGGTTCTGTTGGTTCTGGGAAATCTAGTATGCTCTCAGGAGTTTTGGGAGAGATATTTAAACAATCAGGGAATGTTAAGATTAGTGGAACAAAGGCTTATGTTCCACAATCAGCATGGATACTTACTGGAAATATTAGGGACAATATAACGTTTGGAAAAGAGTTTGATGAAGATAAGTATGAAAAAACTGTTGAAGCATGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGATTTGACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGAATACAGATAGCTAGAGCTGTTTATCAAGATGCTGACATATACCTTTTTGATGATCCTTTCAGTGCTGTTGATGCTCATACCGGCACTCACCTCTTTAAGGAATGTCTTCTGGGGATTCTCAAAGAAAAAACTATACTTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGATCTCATTCTGGTGATGCAAAATGGAAGGATTGCACAAACTGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAATTATTAGTTGGTGCTCATAGCAAAGCACTAGAGTCAGTTCTTACGGTTGGAAATTCAAGTAAAGCAAATTTAAATCCAATACCTGAAGGAGAATGCATCACCTACTCGAACTCAAGTTCTGAACTTTTGCACACACAACTTGACACAGTGCAAGATAATCCTCCTACAGAAAGCAAAGGAAATAATGATGGAAAATTGGTTCAAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATTTGACAACTGTTAAAGGAGGAATTCTTATTCCAATCATACTGTTGGCACAATCTTCATTCCAAATACTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAAATCTGATGCTAAGCCTATATTTGATATGAATTTCATACTACTTATTTATATGGTACTTTCTGTTGCTGGTTCCCTTTGTGTTCTTCTGAGAGCCACGTTGGTGTTAAATGTTGGACTTTGGACAGCACAAACTTTTTTCACAAGAATGTTGCATAATGTGCAACGAGCCCCCATGTCATTTTTTGATTCTACCCCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAGGTGTGCTAGACTTGGAAATGGCAAACAAAATAGGATGGTGTGCTTTCTCAATAATACAAATTCTTGGCACTATTGCGGTGATGTGTCAGGCAGCATGGCAAGTATTTATTATCTTCATTCCAGTAACTGCAATCTGCATATGGTATCAACGATATTATAATCCGACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGCCGTTTCATGAGCACAAATCTTGTCCTTCTGGATGGCTTCTCAAGGCCATGGTTTCATAACGTGTCTGCAATGGAATGGCTTTCTTACAGATTGAACCTGCTTTCAAATTTTGTTTTTGCCTTTTCACTTGTCTTGCTAGTGAGCCTCCCTGAAGGTTTCATAAATCCAAGCATTGCAGGGTTAGCAGTAACATATGGAATCAATTTGAATGTCTTGCAAGCTTCAGTTATATGGAACATTTGCAATGCAGAAAACAAGATGATATCAGTCGAAAGAATTCTTCAATATACAAATATCGCAAGTGAATCACCTCTTGTGATTGAAGACTGCCGGCCGCCAAGAAACTGGCCAGAAACTGGAACAATATGTTTCCAAAATTTGCAGATAAGATACGCTGAACATCTACCATCTGTGTTGAAAAATATCACCTGTACATTTCCTGGAAGGAAGAAAATAGGTGTTGTAGGACGAACCGGCAGTGGAAAATCAACCCTCATACAGGCAATTTTCAGGATTGTTGAACCAAGAGAAGGATGCATTATGATTGACAATGTGGACATATGTGAGATAGGTCTCCATGACCTAAGGTCAAGGCTCAGCATTATCCCACAGGATCCAGCCTTGTTTGAAGGCACAGTCAGGGGAAACCTGGACCCTCTGGAGCAATACTCTGACAGTGAAGTGTGGGAGGCACTAGATAAATGTCAGCTAGGACACCTAGTGAGGGCCAAGGAAGAGAAGTTGGACTCCCCAGTAGTTGAAAATGGTGATAATTGGAGTGCTGGACAAAGGCAATTATTTTGCCTTGGAAGAGCTTTGCTGAAGAAAAGCAGCATTTTAGTACTAGATGAAGCAACAGCCTCAGTGGACTCTGCAACTGATGGGGTGATACAGGATATCATTTGTCAAGAGTTCAACAATCGAACAGTTGTCACAATAGCTCATCGAATCCACACAGTCATCGATAGCGACTTGGTTTTGGTTCTCAGCGATGGGAGAATTGCAGAATATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCCTTCTTCTACAAACTTATAAAGGAGTACTCTAGCAGATCCCATAGCTTCAACAACTTGACAACTCAACATATCCAAGACAGGGAATAA 4545 0.3868 MALENFYNILFSETKLRSFSWTTWQPLVSPCLLEHVTLPIEFGFLVILLVQLLRNCMNNITKQNKVSGVHPNCIKFGLPYMISLACTTLLLAIHALMLILMLNHEPQCTSKLQTFTSEIIQVLSSATILIAICKMSKTNANFHWIVRIWWFFSFLLSIISTALHVHFSIKNKGVIGIKEYADFLGFIVSTCLLVVSTRGKTGIVIIATNGSISEPLLEEKNEKHSSECLKESPYGKATFFQLINFSWLNPLFAVGYKKPLQLDDIPKLDIKDSAEYLNCAFDESLRQVKEKDGTTNPSIYKAIYLFARKKAAINALFAIISASASYVGPYLITDFVNFLTEKDSHGLKTGYLLSLGFLCAKMIEVIAQRQWIFGARQLGLRLRAALISHVYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVLILQTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQTKIMDAKDNRMKTTSEILKNMRTLKLQAWDSEFFKRIESLRSVEYSWLSKSLRQQAFSAFIFWGSPTFISVITFWTCMFLGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKKEEIQHDVIEYVSKDKTEFDVVVEKGRFSWDPETTIPTLDEIELKVKRGMKVAICGSVGSGKSSMLSGVLGEIFKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFDEDKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLLGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQTGTFEELLKQNIGFELLVGAHSKALESVLTVGNSSKANLNPIPEGECITYSNSSSELLHTQLDTVQDNPPTESKGNNDGKLVQDEERETGSISKEVYWSYLTTVKGGILIPIILLAQSSFQILQIASNYWMAWVCPTKSDAKPIFDMNFILLIYMVLSVAGSLCVLLRATLVLNVGLWTAQTFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQGVLDLEMANKIGWCAFSIIQILGTIAVMCQAAWQVFIIFIPVTAICIWYQRYYNPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFMSTNLVLLDGFSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASESPLVIEDCRPPRNWPETGTICFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPREGCIMIDNVDICEIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLEQYSDSEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFNNRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNNLTTQHIQDRE 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04597 1514 Gene3D - 1242 1495 IPR027417 -
Mepo1g04597 1514 Pfam ABC transporter transmembrane region 313 577 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04597 1514 Pfam ABC transporter transmembrane region 952 1186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04597 1514 Gene3D ABC transporter type 1, transmembrane domain 284 613 IPR036640 GO:0005524|GO:0016020
Mepo1g04597 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Mepo1g04597 1514 CDD ABCC_MRP_domain2 1257 1477 - -
Mepo1g04597 1514 FunFam ABC transporter C family member 3 1242 1494 - -
Mepo1g04597 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1491 IPR027417 -
Mepo1g04597 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04597 1514 Gene3D ABC transporter type 1, transmembrane domain 902 1240 IPR036640 GO:0005524|GO:0016020
Mepo1g04597 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 842 IPR027417 -
Mepo1g04597 1514 Pfam ABC transporter 645 779 IPR003439 GO:0005524
Mepo1g04597 1514 FunFam ABC transporter C family member 10 295 609 - -
Mepo1g04597 1514 SUPERFAMILY ABC transporter transmembrane region 308 609 IPR036640 GO:0005524|GO:0016020
Mepo1g04597 1514 MobiDBLite consensus disorder prediction 895 917 - -
Mepo1g04597 1514 SUPERFAMILY ABC transporter transmembrane region 927 1241 IPR036640 GO:0005524|GO:0016020
Mepo1g04597 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 850 IPR003439 GO:0005524
Mepo1g04597 1514 CDD ABCC_MRP_domain1 627 827 - -
Mepo1g04597 1514 CDD ABC_6TM_ABCC_D1 313 601 IPR044746 GO:0140359
Mepo1g04597 1514 FunFam ABC transporter C family member 5 903 1240 - -
Mepo1g04597 1514 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Mepo1g04597 1514 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524|GO:0016887
Mepo1g04597 1514 Gene3D - 625 855 IPR027417 -
Mepo1g04597 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 593 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04597 1514 SMART AAA_5 654 827 IPR003593 GO:0016887
Mepo1g04597 1514 SMART AAA_5 1285 1477 IPR003593 GO:0016887
Mepo1g04597 1514 FunFam ABC transporter C family member 5 612 859 - -
Mepo1g04597 1514 CDD ABC_6TM_ABCC_D2 940 1234 IPR044726 GO:0140359
Mepo1g04597 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 236 1497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04597 Mepo-Chr1 53731446 53741886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04597 615 871 Calmodulin-binding Proteins AT2G36910 29.893 2.33e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04597 - - gmx:100817486 2509.18