Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04596 ATGAATCTTCATGAGTTTGACATCGCTCTTCATTTGGCTTTGACAGAGCTGAGAAGTTTTTCATGGACTACATGGCAGCCATTAGTCTCACCATGCTTGTTGGAACTTGTAACTTTACCTATAGAATTTGGCTTTCTTGTGATATTGTTAGTCCAACTCCTAAGAAATTGCATGAACAACATCACCAAGCAAAACAAGGTCTCAGAAGTGCATCCAAATTGCATAAAATTTGGTTTTCCTTACATGATAAGCTTAGCTTGCACCACTTTATTGTTGGCTATTCATGCCTTAATGCTAATATTGATGCTCAATCATGAGCCTCAGTGTACGTCAAAACTTCAAACTTTTACATCAGAGATCATTCAAGTGTTATCATCTGCAACTATTCTGATAGCAATATGCAAGATGTCGAAAACAAATGCTAATTTCCACTGGATTGTAAGGATTTGGTGGTTTTTCAGTTTCCTTTTGAGCATTATCAGCACAGCCCTTCATGTCCATTTCAGTATAAAAAACAAGGGTGTTATTGGTATAAAGGAATATGCAGATTTCCTTGGTTTGGTTGTTTCAACATGTCTGTTAGTTGTTTCAACAAGAGGGAAAACAGGAATAGTCATCATTGCAACAAATGGTAGCATATCTGAACCACTTTTGGAAGAGAAAAATGAGAAACATTCTTCTGAGTGTCTAAAAGAATCACCATATGGAAAAGCTACATTTTTTCAATTGATAAATTTCTCATGGCTCAATCCGTTGTTTGCGGTAGGGTATAAGAAACCTCTTCAATTGGATGACATTCCTAATATTGACATCAAGGACTCTGCTGAATATCTAAATTGTGCATTTGATGAGAGTCTTAGACAAGTTAAGGAAAAAGATGGAACTACAAATCCATCTATCTACAAGGCAGTCTATTTATTTGCTAGAAAGAAAGTGGCAATGAACGCGTTTTTCGCAATAACAAGCGCTTCAGCATCTTATGTTGGTCCGTATTTGATCACTGACTTTGTGAATTTCCTCACTGAGAAGGACAGTCGTGGACTAAAGAGCGGATACCTTTTGTCGCTAGGTTTCTTATGTGCTAAAATGATTGAGGTCATAGCTCAAAGGCAATGGAATTTCGGTGCTCGGCAATTAGGCCTCCGCCTAAGGGCCGCATTGATATCACATATATATAAGAAGGGCTTACATCTGTCGAGCCGATCGCGTCAAAGTCATTCTGGTGGTGAGATAATGAACTACATGAGTGTAGATGTGCAGAGCATTACGGATTTCGTTTGGTCAGTAAATGTTATTTGGATGCTGCCAATACAAATTTCCTTAGCCGTTGTCATTTTGCAGACAAATCTTGGATTAGGTTCATTGGCTGCATTAGCTGCCACACTAGCAGTGATGACTTTGAACATACCTTTAACGAAAATACAGAAAAGATACCAAACCAAGATCATGGATGCAAAAGACAACAGAATGAAGACCACTTCAGAAATTCTAAAAAACATGAGGACTTTAAAACTTCAAGCATGGGATAGTGAGTTTTTCCAAAGAATAGAATCATTGAGAAGTGTTGAATATGCTTGGTTATCAAAGTCATTAAGACAACGGGCGTTTTCGGCTTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTTTGGACATGCATGTTCCTAGGGATTGAGCTGACAGCTGGAAGGGTCTTATCCGCATTTGCGACATTCCGAATGTTACAAGATCCTATGTTTAGTCTACCTGATCTACTCAATGTCATTGCTCAAGGAAAAGTTTCTGGCGATAGGATTGCTTCTTTCCTTAAGAAGGAAGAAATCCAACATGATGTAATTGAATATGTTTCTAAGGACAAAACAGAATTTGATGTAGTTATTGAGAAAGGAAGATTCAGTTGGGATCCTGAGACAACAATTCCAACACTTGATGAAATTGAGTTGAAAGTTAAGAGAGGAATGAAGGTTGCAATTTGTGGTTCTGTTGGTTCCGGGAAATCTAGTATGCTCTCAGGAGTTTTGGGAGAGATATTTAAACAATCAGGGAATGTTAAGATTAGTGGAACAAAGGCTTATGTTCCACAATCAGCATGGATACTTACTGGAAATATTAGGGACAATATAACCTTTGGAAAAGAGTTCGATGAATATAAGTATGAAAAAACTGTAGAAGCATGTGCATTAAAAAAGGACTTTGAGTTATTCTCGTGTGGTGATTTGACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGAATACAGATAGCTAGAGCTGTTTATGAAGATGCTGACATATACCTTTTTGATGATCCTTTCAGTGCTGTCGATGCTCATACCGGCACTCACCTCTTTAAGGAATGTCTTCTAGGGATTCTCAAAGAAAAAACTATACTTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTAATGCAAAATGGAAGGATTGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAAAATACAGGATTTGAATTATTAGTTGGTGCTCAAAGCAAAGCACTAGAGTCAGTTCTCATGGTTGGAAATTCAAGTAAAGCAAATTTAAATCTAATACCTGAAGGAGAGTGCATCACCTACTCAAACTCAAGTTCTGAACTTTTGCACACACAACTTGACACAGTGCTAGAAAATCCTCCTACAGAAAGCAAAGGAAATAATAATAGAAAATTGGTTCAAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATTTGACAACTGTTAAAGGAGGAATTCTTATTCCAATCATACTATTGGCACAATCTTCATTCCAAATACTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCTGCAAAATCTAATGCTAAGCCTATATTTGATATGAATTTCATACTACTTATTTATATGGTACTTTCTGTTGCTGGTTCCCTTTGTGTTCTTTTGAGAGCCACATTGGTGTTAAATGTTGGACTTTGGACAGCACAAACTTTTTTCACAAGAATGTTGCATAATGTGCAACGAGCCCCCATGTCATTTTTTGATTCTACCCCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACATGGAAATGTTACACAGAATAGGATGGTGTGCTTTCTCAATAATACAAATTCTTGGCACTATTGCGGTGATGTGTCAAGCGGCATGGCAAGTATTTATCATCTTCATTCCAGTAACTGCAATCTGCATATGGTATCAACGATATTATAATCCGACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTTTATCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGCCGTTTCATGAGCACAAATCTTGTCCTTCTGGATGGCTTCTCAAGGTCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTACAGATTGAACTTGCTTTCAAATTTTGTTTTTGCCTTTTCACTTGTCTTGCTAGTGAGCCTCCCTGAAGGTTTCATAAATCCAAGCATTGCAGGGTTAGCAGTAACATATGGAATCAATTTGAATGTCTTGCAAGCTTCGGTTATATGGAACATTTGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAATATACAAATATCGCAAGTGAATCACCTCTTGTGATTGAAGACTGCCGGCCGCCAAGAAACTGGCCAGAAACTGGAACAATATGTTTCCAAAATTTGCAGATAAGATACGCTGAACATCTACCATCTGTGTTGAAAAATATCACTTGCACATTTCCCGGAAGGAAGAAAATAGGTGTTGTAGGACGAACCGGCAGTGGAAAATCAACCCTCGTACAGGCAATTTTCAGGATTGTGGAACCAAGAGAGGGATGCATTATGATTGACAATGTGGACATATGTGAGATAGGTCTCCATGACCTAAGGTCAAGGCTCAGCATTATCCCACAGGAACCAGCCTTGTTTGAAGGCACAGTCAGAGGAAACCTGGACCCTCTAGAGCAATACTCTGACAGTGAAGTGTGGGAGGCACTAGATAAATGTCAGCTAGGTCACCTAGTGAGGGCTAAGGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAACTGGAGTGCTGGACAAAGACAATTATTTTGCCTTGGAAGAGCCTTGTTGAAGAAAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCGGTGGATTCTGCAACTGACGGAGTGATACAGGATATCATCTGCCAAGAGTTTAACAATCAAACAGTTGTCACAATAGCTCATCGAATCCACACAGTTATTGACAGCGACTTGGTTTTGGTCCTCAGTGATGGGAGAATTGCAGAATATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCCTTCTTCTACAAACTTATAAAGGAGTACTCTAGCAGATCCCATAGCTTCAACAACTTGGCAACTCAAGTCCAAGACAGGGAATAA 4545 0.3879 MNLHEFDIALHLALTELRSFSWTTWQPLVSPCLLELVTLPIEFGFLVILLVQLLRNCMNNITKQNKVSEVHPNCIKFGFPYMISLACTTLLLAIHALMLILMLNHEPQCTSKLQTFTSEIIQVLSSATILIAICKMSKTNANFHWIVRIWWFFSFLLSIISTALHVHFSIKNKGVIGIKEYADFLGLVVSTCLLVVSTRGKTGIVIIATNGSISEPLLEEKNEKHSSECLKESPYGKATFFQLINFSWLNPLFAVGYKKPLQLDDIPNIDIKDSAEYLNCAFDESLRQVKEKDGTTNPSIYKAVYLFARKKVAMNAFFAITSASASYVGPYLITDFVNFLTEKDSRGLKSGYLLSLGFLCAKMIEVIAQRQWNFGARQLGLRLRAALISHIYKKGLHLSSRSRQSHSGGEIMNYMSVDVQSITDFVWSVNVIWMLPIQISLAVVILQTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQTKIMDAKDNRMKTTSEILKNMRTLKLQAWDSEFFQRIESLRSVEYAWLSKSLRQRAFSAFIFWGSPTFISVITFWTCMFLGIELTAGRVLSAFATFRMLQDPMFSLPDLLNVIAQGKVSGDRIASFLKKEEIQHDVIEYVSKDKTEFDVVIEKGRFSWDPETTIPTLDEIELKVKRGMKVAICGSVGSGKSSMLSGVLGEIFKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFDEYKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYEDADIYLFDDPFSAVDAHTGTHLFKECLLGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNTGFELLVGAQSKALESVLMVGNSSKANLNLIPEGECITYSNSSSELLHTQLDTVLENPPTESKGNNNRKLVQDEERETGSISKEVYWSYLTTVKGGILIPIILLAQSSFQILQIASNYWMAWVCPAKSNAKPIFDMNFILLIYMVLSVAGSLCVLLRATLVLNVGLWTAQTFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQSVLDMEMLHRIGWCAFSIIQILGTIAVMCQAAWQVFIIFIPVTAICIWYQRYYNPTARELARLAQIQITPILHHFSESLSGAASIRAFDQEGRFMSTNLVLLDGFSRSWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASESPLVIEDCRPPRNWPETGTICFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLVQAIFRIVEPREGCIMIDNVDICEIGLHDLRSRLSIIPQEPALFEGTVRGNLDPLEQYSDSEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFNNQTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNNLATQVQDRE 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04596 1514 CDD ABC_6TM_ABCC_D2 941 1235 IPR044726 GO:0140359
Mepo1g04596 1514 SUPERFAMILY ABC transporter transmembrane region 309 610 IPR036640 GO:0005524|GO:0016020
Mepo1g04596 1514 CDD ABC_6TM_ABCC_D1 316 602 IPR044746 GO:0140359
Mepo1g04596 1514 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524|GO:0016887
Mepo1g04596 1514 FunFam ABC transporter C family member 10 296 610 - -
Mepo1g04596 1514 Gene3D ABC transporter type 1, transmembrane domain 286 614 IPR036640 GO:0005524|GO:0016020
Mepo1g04596 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1492 IPR027417 -
Mepo1g04596 1514 FunFam ABC transporter C family member 5 904 1241 - -
Mepo1g04596 1514 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Mepo1g04596 1514 SMART AAA_5 1286 1478 IPR003593 GO:0016887
Mepo1g04596 1514 SMART AAA_5 655 828 IPR003593 GO:0016887
Mepo1g04596 1514 FunFam ABC transporter C family member 3 1243 1495 - -
Mepo1g04596 1514 Gene3D - 626 858 IPR027417 -
Mepo1g04596 1514 FunFam ABC transporter C family member 5 613 860 - -
Mepo1g04596 1514 SUPERFAMILY ABC transporter transmembrane region 928 1242 IPR036640 GO:0005524|GO:0016020
Mepo1g04596 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 850 IPR027417 -
Mepo1g04596 1514 Pfam ABC transporter 1277 1425 IPR003439 GO:0005524
Mepo1g04596 1514 CDD ABCC_MRP_domain2 1258 1478 - -
Mepo1g04596 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1223 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04596 1514 Gene3D ABC transporter type 1, transmembrane domain 903 1241 IPR036640 GO:0005524|GO:0016020
Mepo1g04596 1514 Gene3D - 1243 1496 IPR027417 -
Mepo1g04596 1514 Pfam ABC transporter transmembrane region 953 1187 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04596 1514 Pfam ABC transporter transmembrane region 314 580 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04596 1514 CDD ABCC_MRP_domain1 628 828 - -
Mepo1g04596 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 851 IPR003439 GO:0005524
Mepo1g04596 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 316 594 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04596 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 237 1498 - -
Mepo1g04596 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1260 1494 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04596 Mepo-Chr1 53718219 53724664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04596 616 868 Calmodulin-binding Proteins AT2G36910 29.197 2.27e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04596 - - gmx:100817486 2434.06