Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04586 ATGGATCAGAGAAATACAAGGGCTATTATATGTCTTTTGTGTCGACATATGAGAAGAAGGCATGGCGCTGATTGTGAATTTGGTCAATATTTTTCGACCAACAGGTATGCTGACTTTCAGAGTGTCATGCAGATTTTAGGGTTAAGTCGCCTGATGAGAATCATGCGATCAATAAAACCAATTCAAAGACAAGCTGTTGCTGATTCGCTTCTCACAGAAGGAGAAGCTTGGCGAATTAACCCAGATCGAGGTTTTCTTGGACACCAAGTGGAGCTGGGTGCCCAATTAAACACCTCTTGGAATGAAATATAA 312 0.4135 MDQRNTRAIICLLCRHMRRRHGADCEFGQYFSTNRYADFQSVMQILGLSRLMRIMRSIKPIQRQAVADSLLTEGEAWRINPDRGFLGHQVELGAQLNTSWNEI 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04586 103 Pfam Lateral organ boundaries (LOB) domain 11 99 IPR004883 -
Mepo1g04586 103 ProSiteProfiles LOB domain profile. 9 103 IPR004883 -
Mepo1g04586 103 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 98 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04586 5 96 AS2 family AT2G19820 32.258 6.45e-15 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g04586 LOB 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04586 - K02337 tpra:123886926 92.8189