Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04557 ATGATTCTTGTTCTAAGAAGCTGGATTTTGAGTTCGTATGTTTTTGTTAGTTTCTTGTTGCTGATTAGTTTTGGTATAACCTATGGGACTGAAACTGATATCTTCTGTTTGAAAAGTATAAAAAATTCGATTCAAGACCCGAATAATTATTTGACATCTTCATGGAATTTCAACAATAAAACTGAAGGGTTTATATGTAGATTTAATGGTGTTGAATGTTGGCATCCTGATGAGAATAAAGTCTTGAATCTCAAATTATCAAATATGGGACTCAAGGGTCAATTTCCTCGGGGCATTATTAATTGTTCTAGCATGACAGGATTAGATCTTTCGGTCAATGATCTATCTGGAACCATTCCAGGAGATATATCAAAGCTTCTAGAATATGTGACGTCTCTTGATCTATCTTCAAATGAATTTTCTGGGGAGATACCTGATAGTCTTGCAAATTGTACTTATCTGAATACCCTTAAACTTAGTCAGAACCGACTCACCGGTCAAATTCCTTTACGATTAGGCACTCTCGATCGTATTAAGACATTCGATGTATCCAACAATCTTTTGACCGGGCAAGTTCCAAACTTCACTGTTGGTAATGTTGAGGTAAATTATGCAAATAATCTAGGTCTTTGTGGACAACCTTCATTAGGGGTTTGCAAGCCTACGGCTTCCTCCAAGAGTAACACCGCAGTTATAGCTGGAGCTGCTGTAGGTGCGGTGACTCTTGCAGCGTTAGGATTGGGCGTTTTTATGTTCTTCTTTGTGCGTCGCAGTGCTTATAGGAAGAAGGAAGAAGATCCTGAAGGAAACAAATGGGCAAGAAGTCTTAAAGGAACTAAAGGAATTAAGGTATCTCTATTTGAGAAATCAATTTCAAAAATGAAATTGAGCGATCTCATGAAGGCTACCAACAACTTCAGTAATATCAATATCATTGGGACAGGAAGAACAGGAACAGTTTACAAAGCTACCCTTGAGGACGGCACGGCATTTATGGTGAAAAGATTGCAGGAATCTCAACACTCCGAGAAAGAGTTTATGTCTGAGATGGCGACACTGGGGACTGTCAAACATCGTAATCTGGTTCCACTTTTAGGTTTTTGTGTGGCCAAAAAGGAGAGGCTTTTGGTCTTTAAAAACATGCCGAATGGAATGCTCCATGATCAACTACATCCTGCTGCTGGTGAGTGCACACTTGACTGGCCTTCGAGACTCAAAATCGCAATTGGAGCAGCCAAAGGATTTGCATGGCTTCATCATAGCTGCAATCCTCGCATCATCCACCGAAACATAAGCTCTAAGTGTATCTTGTTGGACGCAGATTTTGAGCCCAAAATTTCCGATTTCGGCCTTGCCAGATTGATGAACCCGCTCGATACGCATTTAAGTACTTTCGTAAATGGGGAGTTCGGCGATTTTGGTTATGTGGCTCCTGAGTATACAAAAACCTTGGTTGCTACGCCTAAAGGCGATGTTTTTAGCTTTGGGACTGTGCTTCTCGAGTTGGTGACCGGTGAAAGACCTGCAAATGTGGCTAAAGCACCGGAAACTTTTAAAGGAAATCTTGTAGAATGGATTACGGAACTTTCAAGCAACTCAAAACTCCACGATGCCATCGACGAGTCACTTCTCAACAAGGGTGATGATAACGAGCTTTTCCAATTTTTAAAGGTTGCATGCAACTGTGTTACAGAAATTCCAAAGGAGAGGCCAACCATGTTTGAAGTATATCAGTTTTTAAGAGCTATTGGTGGCAAGTACAATTTCCAAACTGAAGATGAAATATTGGTACCTGAAGATATTATTGGTGATAATAACATGGTGGAACTCATTGTTGCTAGAGAAGGAAAATAA 1854 0.4008 MILVLRSWILSSYVFVSFLLLISFGITYGTETDIFCLKSIKNSIQDPNNYLTSSWNFNNKTEGFICRFNGVECWHPDENKVLNLKLSNMGLKGQFPRGIINCSSMTGLDLSVNDLSGTIPGDISKLLEYVTSLDLSSNEFSGEIPDSLANCTYLNTLKLSQNRLTGQIPLRLGTLDRIKTFDVSNNLLTGQVPNFTVGNVEVNYANNLGLCGQPSLGVCKPTASSKSNTAVIAGAAVGAVTLAALGLGVFMFFFVRRSAYRKKEEDPEGNKWARSLKGTKGIKVSLFEKSISKMKLSDLMKATNNFSNINIIGTGRTGTVYKATLEDGTAFMVKRLQESQHSEKEFMSEMATLGTVKHRNLVPLLGFCVAKKERLLVFKNMPNGMLHDQLHPAAGECTLDWPSRLKIAIGAAKGFAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPLDTHLSTFVNGEFGDFGYVAPEYTKTLVATPKGDVFSFGTVLLELVTGERPANVAKAPETFKGNLVEWITELSSNSKLHDAIDESLLNKGDDNELFQFLKVACNCVTEIPKERPTMFEVYQFLRAIGGKYNFQTEDEILVPEDIIGDNNMVELIVAREGK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04557 617 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 381 593 - -
Mepo1g04557 617 Gene3D Transferase(Phosphotransferase) domain 1 381 599 - -
Mepo1g04557 617 ProSiteProfiles Protein kinase domain profile. 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04557 617 FunFam Nuclear pore complex protein NUP107 30 194 - -
Mepo1g04557 617 SUPERFAMILY L domain-like 31 202 - -
Mepo1g04557 617 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 582 - -
Mepo1g04557 617 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Mepo1g04557 617 Pfam Protein tyrosine and serine/threonine kinase 309 580 IPR001245 GO:0004672|GO:0006468
Mepo1g04557 617 SUPERFAMILY Protein kinase-like (PK-like) 284 580 IPR011009 -
Mepo1g04557 617 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 267 380 - -
Mepo1g04557 617 CDD STKc_IRAK 312 580 - -
Mepo1g04557 617 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Mepo1g04557 617 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04557 Mepo-Chr1 53402186 53405980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04557 15 594 Receptor kinase-like Gene Family AT3G28450 45.904 3.83e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mepo1g04557 PK_Tyr_Ser-Thr 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04557 - - psat:127076602 1074.31