Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04551 ATGTGGGAGTGGTCTTCCATACTCAAGGGGGATGACCTTACAGGAAAACATTTCAACTATCCTCCTGATGGTCCCACTTATTCATGGTATGAAAACTCAAATGTGCCTCTTGAAAATCCCTTTTCAATTGTTGAGTTGCACACATCTTCACAAAATTCGGAGGAGATATACAAACCTACCTTGGACATAAAGTTAAGTCAAGCTTCAAAATCATTTTCTAGGCAGGTTATGAAAATATTGTGTTCGCATCCAAATGGGATCTCCATAGGAGATCTTCGTGCAGAGTTGACAAACTGTGATATGCCTTTGGTTAAACGTTTCTATGGAAATAAAAAGTTTTCCAACTTTCTAATATCTATATCATATGTACAACTCCAGTATTTAGGAGGGGATAATTTTTGGGTGTGTTTGGTCCCATCAACGACATCTGCTGTTAAGAATAACCAGAACGATGGTGCCGCAACTCAAAAGTTGCACAATGACGGTAAAAATATGGATAGAAGTGCAGATGGGGTTCCCAAAATATCCTCATCGTGTGTTAACAGCGACGGTGATGATTTAAAATCATTCCAATCTAACCCTTCACAAGGAAAACCTCTCGGGGAACACGCTGATGGTAAATCATCAACTCCTTTGTTCATGGACAGTATTGTGCATCAGCCTCCAAATGAGTTGCAGAAAAAATCTCTGGAGGTGGATGTGGCCCGTGCACCATTGCCGCAGATTCAACTTCTTCCAAATGACAACAATATTTCCAAAAAATCTGACAATGACGTTGTTAAGTCTGATGATGGAAATCCTGAAATTCTTGAAAAAATAAACCCTTCACAGAATCCCTCTACTTCTAATGATTGCACCACATTGAAAAACAACCATGAGATTCCAACCAGAAAGGAGGTTGATGAAGTTTGTCGTAGCCCATTTACTTCAACTTTCTGTAGTTGGATTAGTAGTTGGTGGACATTTTGGAAAAGCAATGCTAAGTCCGAAATAGACCATAGTGCTAGTCATTTTGAAGAGCCCAAGTCATCAGAACTGCAACAGGATCTTAGTCATCCTCTGCAACCTCATTGGGATAACTTTAAATTTAGGGTTGCAGTATGGTGGGACTTTGACAGTTGTGGCGTCCCCTCCGGCATTAGCTTTTTGAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCCAACGGGATTAAGGGCCCAATTCATATTGACGCTTATGGCGATGTTTCTCAACTTTCACAGATCAAACAAGAAGCACTTTTCCTATCCGGCATTGTTCTCCACCACATTCCAGGTGGAAAGAACAAGAACAAATGCTTTGCGGATTGGTTTTCTCAAAATCCCTCACCCGGACACCTCTTTTTGATATCTGGTGATAAAGACATAAACTTCTCCTGCATATTGCTTCGAAACTTTCATAGGAGGAACGACAACATCTTGCTTGCATGTCCAGGAAAGGCTGAAGGTTGTGTCAGCATAAGAGCATTTATAGTATGGCGGTGGTCTTCAGTGCTCAAGGGGAAATATCTTACTGGAAAATATTTCTGTTATCCTCCTGAGTGGTATGCTAAGGTGCGGGCGCCTCTTGAATATCCTCCAGAGTGGTATAGAAACTGGAAGGTGCATCCTAAAAATCCCTTCTTAGCTGCTGAGGAGCCCACATCTTCACAAAATGCAGAGATCCATATACCTTTCTCGTTTTTTGGTGAAGATCAAAATGTGTGTTATAGGCCGGTTAGGGAGGTATTGAGTTCGTACCCGAACGGAATCCCCGTCGGAGAACTTAAGATGAGATTGGGTATTCCTGGAGATACTAAAATGTTTTCCCAAGTGATAGCATCTATACCACAAGTACAACTCTTGTATATAGGAGATGATAATTTTTGTGTACGTTTGATCCCATCAACAACATCTACCGTTAAGAAGAAGAAGCAGAGGGTTGCTGATCATTCAGAAATGCGTGTGTTATTTTCTACTGATTCTTTTGGGGATGATGTGGAAACTTTTGTTTTCTCGTCTAGAGGATCACGTCTTATTTCCCGATCAAGAAGCAGGGAGGATCTGGCTCATAGATTACAAAGGCATGGACCCATGATTTTTATGTCTCTCACCGAAAATGAAATCCTTCAATTGGTGGAATTGTTGATAACAAAGTTGAAATGGTTGAAGGAAAGCCCCTCTGAAGGAAGAGAAATAGGGGAGAGAGACTAA 2214 0.4101 MWEWSSILKGDDLTGKHFNYPPDGPTYSWYENSNVPLENPFSIVELHTSSQNSEEIYKPTLDIKLSQASKSFSRQVMKILCSHPNGISIGDLRAELTNCDMPLVKRFYGNKKFSNFLISISYVQLQYLGGDNFWVCLVPSTTSAVKNNQNDGAATQKLHNDGKNMDRSADGVPKISSSCVNSDGDDLKSFQSNPSQGKPLGEHADGKSSTPLFMDSIVHQPPNELQKKSLEVDVARAPLPQIQLLPNDNNISKKSDNDVVKSDDGNPEILEKINPSQNPSTSNDCTTLKNNHEIPTRKEVDEVCRSPFTSTFCSWISSWWTFWKSNAKSEIDHSASHFEEPKSSELQQDLSHPLQPHWDNFKFRVAVWWDFDSCGVPSGISFLNVAPSIMGVLRANGIKGPIHIDAYGDVSQLSQIKQEALFLSGIVLHHIPGGKNKNKCFADWFSQNPSPGHLFLISGDKDINFSCILLRNFHRRNDNILLACPGKAEGCVSIRAFIVWRWSSVLKGKYLTGKYFCYPPEWYAKVRAPLEYPPEWYRNWKVHPKNPFLAAEEPTSSQNAEIHIPFSFFGEDQNVCYRPVREVLSSYPNGIPVGELKMRLGIPGDTKMFSQVIASIPQVQLLYIGDDNFCVRLIPSTTSTVKKKKQRVADHSEMRVLFSTDSFGDDVETFVFSSRGSRLISRSRSREDLAHRLQRHGPMIFMSLTENEILQLVELLITKLKWLKESPSEGREIGERD 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04551 737 MobiDBLite consensus disorder prediction 245 284 - -
Mepo1g04551 737 Pfam NYN domain 364 475 IPR021139 GO:0004540
Mepo1g04551 737 Pfam OST-HTH/LOTUS domain 70 129 IPR025605 -
Mepo1g04551 737 Gene3D - 67 137 IPR041966 -
Mepo1g04551 737 MobiDBLite consensus disorder prediction 254 268 - -
Mepo1g04551 737 MobiDBLite consensus disorder prediction 146 215 - -
Mepo1g04551 737 CDD PIN_limkain_b1_N_like 364 485 - -
Mepo1g04551 737 PANTHER LIMKAIN B LKAP 341 720 IPR024768 GO:0005777|GO:0010468
Mepo1g04551 737 MobiDBLite consensus disorder prediction 174 198 - -
Mepo1g04551 737 ProSiteProfiles OST-type HTH domain profile. 68 139 IPR025605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04551 Mepo-Chr1 53351116 53355515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04551 359 508 C2H2 Transcription Factor Family AT5G61190 35.625 3.72e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04551 - - mtr:25498900 1043.88