Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04545 ATGGATATGGATGACGATCAAGAGATGGAGAATTTCGGAACTGAGAAAGATTTTGAAGGTGGTCAATGGGTTAATGGTGAATTCTACTTTCGAAAGCGCCGAGAGAAAGCTCGAACTCAAACCAAAGATGATGTTCTATATGGAGTTTTTGGTGATTCCGAAGATGACGATGATGATGGGTATTCTAGTAAAAAGCGAAGAAAAGATTTTGGAAGGAAACAGGATCTCACTAAACCCGTGAATTTCATTTCAACTGGAAATTTTATGCCGGATAAGGATAATGTTGATGAGAATTTGAAAGAACAGGATGATGATGAAGATAGGCCTGGTTTAGGGTTAGGTTTTGGGTCGGCTGGTATTTTGGGGTCTGGTTTAGGATTTAATGCTGGTCGTGGTGTGAATGGTTCAGATAGAAATGAAGAATCTGATGAGAATGATAATCGGGATGATAAATTTTTGCCTACTGCGTTTGGGAAGAAGATTAAGGAGGGAGCCATGAAGAGGGAGAAGGAGAGATTGGAGGAGAAGAAGAAGAAGAAGGGGAAGAAGCCGGGGATGGGTTTCGGTCAGGAGGGGTCTGTGGATGTTGGGAAATTCGAGAGTCATACGAAGGGAATTGGAATGAAGCTGCTTGAGAAGATGGGTTATAAAGGGGGTGGTCTTGGGAAGAATGAGCAGGGTATTTTAAATCCTATTGAAGCGAAGTTGAGGGCTAAAAATTCTGGTCTTGGATTTAACGAATCGAAGGGAACCACAATGCCGTTGCCTGCTTTGCAGACGGAGAAGAAGACTGAACCGGGAGTTGTGCAGCCTACAGTTGGAAGAACACGTTCGTGGTTAAAGCCGCCGAAGAAGAGGAATAAAGAAGAGGAAAAGTATGTAACTGCTGAGGAGTTGTTGGCTAGCAAGCAAGAAGAAGAATCAGAGGTTGTTCAGAAGATTTATGATATGAGGGGGCCGCAGGTACGAGTTTTAACAAATTTGTCTGATTTGAATGCCGAGGAGAAAGCAAAGGAAAATGATGTCCCAATGCCTGAGCTTCAGCATAACGTAGCACTAATAGTTCGGATAGCTGAAACCGACATCCAAGAGATTGATAGAGATTTGAGGAAAGAGAGGGATATAGCACTTAGCTTGAAAAAAGAAAAGGAGAAGTTGGAAGCTGAGGCAGCGTTTCAAAAGAAGCAGCTCGATAATTATGAAAAGATAATGAGTGTGCTGGACAGAGTTGGAGAAGAGAACACCTTAGGAACATTAACACTGGATTCCCTTGCTCAATGCTTTATGGACATGCACAAAAGATATGCTGAGGATTATAAGCTGTGTAACTTGTCATGCATTGCTTGCTCATATGCCCTGCCTTTGTTTATCAGAATGTTCCAAGGATGGGATCCTCTTCGAAATCCATCTCATGGTTTGGAGTTGGTATCACAGTGGAAGGCACTGCTTCAAGGAGATGATTGTTTTGATATATGGGACATGTCATCACCTTATACTCAATTGGTTTCAGAGGTTGTATTGCCAGCTGTCAGAATATCTGGTATCAATACCTGGCATGCACGGGATCCTGAACCAATGCTACGGTTTTTGGAGTCTTGGGAAAAATTACTTCCTTCTTCAGTTCTTGCTACTATATTAGACAACATAGTCATGCCAAAACTATCAAGTGCAGTAGGTACTTGGGAACCACATCTTGAGACCATTCCTATCCACACATGGGTGCATCCATGGCTACCCCTGCTAGGGCACAAACTGGAGGTTATCTACCAGACAATTCGTTTCAAATTGAGTACTGTTCTTGGTGCATGGCACCCAAGTGATGGTTCTGCATATGCTATATTGTCTCCTTGGAAGACTGTATTTGATTCTGATAGTTGGCAACAACTTATGCACCGTTTTATCGTACCTAAGCTGAAGGCTGTCTTGCAAGATGACTTCCAAGTGAACCCGGCAAGTCAGAATCTTGATCAGTTTTATTGGGTTATGAACTGGGCTTCAGCTATTCCAATTCATCTGATGGTTGACACGATGGAGATCTTCTTTGCCAAGTGGCTTACGGTTTTGTATCGTTGGTTGTGCTCAAATCCTAACTTTGATGAAGTTACAAAATGGTATTTAGGCTGGAAAGAACTTATTCCAAAAGAACTTTTGGCAAATGAAAGTATTCGATACAAGCTCAATTGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTTGTGCAACCTGGTTTGAAGGAGAAGATAAGCTATATCAGGGTAAGTGAGCAAAGGAAATTTGAGACTCAGCAGAAAGCAGCAGCTTCTGCTCAACAACAAGCTGCTGCAAGCATGGCTGGTGGTGCAGATGGTGTGAATGAAATGAGTGTTAAAGATCTCATTGAGGCCTATGCTCGGGATAATGGTTTACTGTTCAAACCTAAATCTGGTAGAACACATAACGGTCATCAGATATATGGGTTTGGCAATGTCAGCATAATAATCGACTCTCTAAATCAAAAGGTCTATGCCCAAAATGAGGAAACATGGTCTTTAGAAACTCTTGAACGGTTGCTAGAATTACATAATAAATCTCTTAGTAAAAGACGTTGA 2598 0.4196 MDMDDDQEMENFGTEKDFEGGQWVNGEFYFRKRREKARTQTKDDVLYGVFGDSEDDDDDGYSSKKRRKDFGRKQDLTKPVNFISTGNFMPDKDNVDENLKEQDDDEDRPGLGLGFGSAGILGSGLGFNAGRGVNGSDRNEESDENDNRDDKFLPTAFGKKIKEGAMKREKERLEEKKKKKGKKPGMGFGQEGSVDVGKFESHTKGIGMKLLEKMGYKGGGLGKNEQGILNPIEAKLRAKNSGLGFNESKGTTMPLPALQTEKKTEPGVVQPTVGRTRSWLKPPKKRNKEEEKYVTAEELLASKQEEESEVVQKIYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVALIVRIAETDIQEIDRDLRKERDIALSLKKEKEKLEAEAAFQKKQLDNYEKIMSVLDRVGEENTLGTLTLDSLAQCFMDMHKRYAEDYKLCNLSCIACSYALPLFIRMFQGWDPLRNPSHGLELVSQWKALLQGDDCFDIWDMSSPYTQLVSEVVLPAVRISGINTWHARDPEPMLRFLESWEKLLPSSVLATILDNIVMPKLSSAVGTWEPHLETIPIHTWVHPWLPLLGHKLEVIYQTIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSDSWQQLMHRFIVPKLKAVLQDDFQVNPASQNLDQFYWVMNWASAIPIHLMVDTMEIFFAKWLTVLYRWLCSNPNFDEVTKWYLGWKELIPKELLANESIRYKLNCGLDMMNQAVEGMEVVQPGLKEKISYIRVSEQRKFETQQKAAASAQQQAAASMAGGADGVNEMSVKDLIEAYARDNGLLFKPKSGRTHNGHQIYGFGNVSIIIDSLNQKVYAQNEETWSLETLERLLELHNKSLSKRR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04545 865 Coils Coil 286 306 - -
Mepo1g04545 865 MobiDBLite consensus disorder prediction 1 20 - -
Mepo1g04545 865 Pfam G-patch domain 203 244 IPR000467 GO:0003676
Mepo1g04545 865 MobiDBLite consensus disorder prediction 58 75 - -
Mepo1g04545 865 Pfam Tuftelin interacting protein N terminal 6 106 IPR022159 -
Mepo1g04545 865 Coils Coil 159 179 - -
Mepo1g04545 865 Coils Coil 369 403 - -
Mepo1g04545 865 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 3 853 IPR045211 GO:0000390
Mepo1g04545 865 ProSiteProfiles G-patch domain profile. 203 248 IPR000467 GO:0003676
Mepo1g04545 865 PIRSF TFIP11 3 860 IPR024933 -
Mepo1g04545 865 SMART G-patch_5 201 246 IPR000467 GO:0003676
Mepo1g04545 865 MobiDBLite consensus disorder prediction 136 185 - -
Mepo1g04545 865 Pfam GC-rich sequence DNA-binding factor-like protein 421 688 IPR022783 -
Mepo1g04545 865 MobiDBLite consensus disorder prediction 35 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04545 Mepo-Chr1 53206209 53209359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04545 190 247 C2H2 Transcription Factor Family AT5G26610 44.828 1.22e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04545 K13103 - gmx:100783256 1299.26