Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04530 ATGTATGGCGGCATCGCTAACAATCAATTTCTAGGGACACACTTCACACAATGGGATTTGATTCAATACAAGAAGAAAGCTGCTGCTCCTTCTGCTGATGAATATGATGCTAGATATATCATGCCACTCAAGAAAGTTGAATACACTAATCCAATTCGCAAATACAATGAGATGATTGGAAGTACTTCTTCCGGTATTTCTTTTCTTGCGTTGACGGAGCCCGAGGATATTTGTAAGGATGGTGGTTTAGTAAAGAAGTTACTCAAGCCCGGGGATGACAAATATCAACATGTTGATGATTATGATTATGTTTTAGTCAAGTACGAAGCATGTCTTGATGATGGAACTCTTATTAAAAAATCTGATGATGATGGAGTGGAGTTCACACTCAACGATGGTCATTTTTGTCCTGCATTATCTATCGCTGTCAAGACCATGAAGATCAGAGAAAAAGTCATTTTAACTGTTAAGCCACAATATGGATTTGGTGACAAGGGCAAGCCACCTCACCATGATGAAGGTTCAGTTCCACCTAACGCAACATTGCAGATTATTCTTGAGTTTGTTTCTTGGAAGGAAGGACCTTTTCGTAAGATGGTCCTCATGGAAGGAGAAGGAGACGACTGTCCAAATGAGGGAGCTCTTGTGAAATTGAAACTAATTGGTAAGCTGCAAGATGGCACTGTATTTTTTAAGAAGGGCTATAGTGATGGTGATGAAGGGGAGCTGTTTGAATTTAAAACAGATGAGGAGCAAGTGATTGATGGGCTTGATAGAGCTGTACTGACCATGAAGAAGGGTGAGGTAGCTTTGTTGACTATTGCGCCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCAGGAATTGGCAGTGGTTCCTCCTAATTCAACCGTGTATTATGAGGTTGAGCTAGTATCGTTCGTAAAGGCTAAGGAGGTATCGGACATGAACACTAAAGAGAAGATAGAAGCTGCTCTTGAGAAACGACAAGAAGGCATAGCATTATTTTATGCTGCTGAATATGCAAGAGCTTCTAAAAGATTTCAGAAGGCTCTGAAGTTTATAAAGTATGATACTTCCTTTCCTGATGAGGATAAGGAAATTGTAAGCTTGAGGTTTTCTTGTAATCTGAGCAATGGATCGTGCTTGATGGAATTGAAAGATTATGAACGGGCAAACAAATATTTTAAGGATCTCAACTTAAAGCGCGTAGACACTAAAACGTCGGCTGCAAACCGGAAACTTTCACGCAGGCTCAGGAGGAAAAACTTAGAGGATTGTCCTGGCATTTGCATATGA 1299 0.4034 MYGGIANNQFLGTHFTQWDLIQYKKKAAAPSADEYDARYIMPLKKVEYTNPIRKYNEMIGSTSSGISFLALTEPEDICKDGGLVKKLLKPGDDKYQHVDDYDYVLVKYEACLDDGTLIKKSDDDGVEFTLNDGHFCPALSIAVKTMKIREKVILTVKPQYGFGDKGKPPHHDEGSVPPNATLQIILEFVSWKEGPFRKMVLMEGEGDDCPNEGALVKLKLIGKLQDGTVFFKKGYSDGDEGELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTVYYEVELVSFVKAKEVSDMNTKEKIEAALEKRQEGIALFYAAEYARASKRFQKALKFIKYDTSFPDEDKEIVSLRFSCNLSNGSCLMELKDYERANKYFKDLNLKRVDTKTSAANRKLSRRLRRKNLEDCPGICI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04530 432 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 192 IPR001179 GO:0003755
Mepo1g04530 432 SUPERFAMILY FKBP-like 196 327 - -
Mepo1g04530 432 SUPERFAMILY FKBP-like 71 194 - -
Mepo1g04530 432 Gene3D Tetratricopeptide repeat domain 310 425 IPR011990 GO:0005515
Mepo1g04530 432 SUPERFAMILY TPR-like 316 397 IPR011990 GO:0005515
Mepo1g04530 432 Gene3D - 69 193 IPR046357 GO:0003755
Mepo1g04530 432 PANTHER PEPTIDYLPROLYL ISOMERASE 35 195 - -
Mepo1g04530 432 FunFam Peptidylprolyl isomerase 195 310 - -
Mepo1g04530 432 Gene3D - 194 309 IPR046357 GO:0003755
Mepo1g04530 432 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 210 305 IPR001179 GO:0003755
Mepo1g04530 432 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 185 IPR001179 GO:0003755
Mepo1g04530 432 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 213 308 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04530 Mepo-Chr1 53061434 53065788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04530 66 394 Calmodulin-binding Proteins AT3G25230 61.721 2.14e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04530 K09571 - gmx:100803189 439.884