Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04520 ATGTATGGCGGCATCGCTAACAATCAATTTCTAGGGACACACTTCACACAATGGGATTTGATTCAATACAAGAAGAAAGCTGCTGCTCCTTCTGCTGATGAATATGATGCTAGATATATCATGCCACTCAAGAAAGTTGAATACACTAATCCAATTCGCAAATACAATGAGATGATTGGAAGTACTTCTTCCGGTATTTCTTTTCTTGCGTTGACGGAGCCCGAGGATATTTGTAAGGATGGTGGTTTAGTAAAGAAGTTACTCAAGCCCGGGGATGACAAATATCAACATGTTGATGATTATGATTATGTTTTAGTCAAGTACGAAGCATGTCTTGATGATGGAACTCTTATTAAAAAATCTGATGATGATGGAGTGGAGTTCACACTCAACGATGGTCATTTTTGTCCTGCATTATCTATCGCTGTCAAGACCATGAAGATCAGAGAAAAAGTCATTTTAACTGTTAAGCCACAATATGGATTTGGTGACAAGGGCAAGCCACCTCACCATGATGAAGGTTCAGTTCCACCTAACGCAACATTGCAGATTATTCTTGAGTTTGTTTCTTGGAAGGAAGGACCTTTTCGTAAGATGGTCCTCATGGAAGGAGAAGGAGACGACTGTCCAAATGAGGGAGCTCTTGTGAAATTGAAACTAATTGGTAAGCTGCAAGATGGCACTGTATTTTTTAAGAAGGGCTATAGTGATGGTGATGAAGGGGAGCTGTTTGAATTTAAAACAGATGAGGCAGAGCAAGTGATTGATGGGCTTGATAGAGCTGTACTGACCATGAAGAAGGGTGAGGTAGCTTTGTTGACTATTGCGCCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCGGGAATTGGCAGTGGTTCCTCCTAATTCAACCGTGTATTATGAGGTTGAGCTAGTATCGTTCGTAAAGGCTAAGGAGGTATCGGACATGAACACTAAAGAGAAGATAGAAGCTGCTCTTGAGAAACGACAAGAAGGCATAGCATTAGTTTATGCTGCTGAATATGCAAGAGCTTCTAAAAGATTTCAGAAGGCTCTGAAGTTTATAAAGTATGATACTTCCTTTCCTGATGAGGATAAGGAAATTGTAAGCTTGAGGTTTTCTTGTAATCTGGGCAATGCATCGTGCTTGATGGAATTGAAAGATTATGAACGGGCAAACAAATATTTTAAGGATCTCAACTTAAAGCGCGTAGACACTAAAACGTCGGCTGCAAACCGGAAACTTTCACGCAGGCTCAGGAGGAAAAACTTAGAGGATTGTCCTGGCATTTGCATATGA 1302 0.4063 MYGGIANNQFLGTHFTQWDLIQYKKKAAAPSADEYDARYIMPLKKVEYTNPIRKYNEMIGSTSSGISFLALTEPEDICKDGGLVKKLLKPGDDKYQHVDDYDYVLVKYEACLDDGTLIKKSDDDGVEFTLNDGHFCPALSIAVKTMKIREKVILTVKPQYGFGDKGKPPHHDEGSVPPNATLQIILEFVSWKEGPFRKMVLMEGEGDDCPNEGALVKLKLIGKLQDGTVFFKKGYSDGDEGELFEFKTDEAEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQRELAVVPPNSTVYYEVELVSFVKAKEVSDMNTKEKIEAALEKRQEGIALVYAAEYARASKRFQKALKFIKYDTSFPDEDKEIVSLRFSCNLGNASCLMELKDYERANKYFKDLNLKRVDTKTSAANRKLSRRLRRKNLEDCPGICI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04520 433 Gene3D Tetratricopeptide repeat domain 311 426 IPR011990 GO:0005515
Mepo1g04520 433 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 192 IPR001179 GO:0003755
Mepo1g04520 433 SUPERFAMILY FKBP-like 196 328 - -
Mepo1g04520 433 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 210 306 IPR001179 GO:0003755
Mepo1g04520 433 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 185 IPR001179 GO:0003755
Mepo1g04520 433 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 213 309 IPR001179 GO:0003755
Mepo1g04520 433 FunFam Peptidylprolyl isomerase 195 311 - -
Mepo1g04520 433 Gene3D - 67 193 IPR046357 GO:0003755
Mepo1g04520 433 SUPERFAMILY TPR-like 317 398 IPR011990 GO:0005515
Mepo1g04520 433 PANTHER PEPTIDYLPROLYL ISOMERASE 35 195 - -
Mepo1g04520 433 Gene3D - 194 310 IPR046357 GO:0003755
Mepo1g04520 433 SUPERFAMILY FKBP-like 71 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04520 Mepo-Chr1 52962359 52966150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04520 66 395 Calmodulin-binding Proteins AT3G25230 61.243 3.02e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04520 K09571 - gmx:100794411 432.95