Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04502 ATGAATTTCTATTGCGTAGGTGATAGTTGTTGGAAGAAGAAGCTACCACTCACAAATGGGAAATATGACGCAACTCTTAATGGTGCTAAAGCCTTTTTGAAAGTTAGAATAGATAATACCTCCATTCTTGGTGTCTTTCCTCCAAATTCAACCATTGTGAACAAGATCAATAACAGAGAAACTTTGGTTTTGGTTGCTTCTGTGCTTTTGGGTAGCTCTACTATTCTCAATGTTGTATTGATTGTAGCGATATGTGTTTGTACCTCCATCATTTTTCAGTACAAGAAGAAGCTTAGAAGAGTTAGCAAAAGTGACACTTCTGTTGAAACCAATTTGCGTTGCTTCACTTATGAAGAGCTTGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTACGAAGGAGTCATCAACAACGACACAACTTCCAAAACTTGCGTGGCAGTGAAGAAATTGAACAGTTTTCTGTTGGATCAAGCTCATAGGGAATTCAGGAATGAACTAAATGTCATTGGTCTCACTCATCACAAGAATTTGGTTCGTTTACTTGGATTTTGTGAGAGTGGAAGTGAAAGACTGCTTGTTTATGAGTACATGAGCAATAGCACTTTGGCAAGTTTTCTATTCAATGAAGAGAAACAGAAGCCAAGTTGGAAACTAAGGCTAGAACTTGCAATAGGAATAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATCACTAGGATCATTCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGATTACTTCAATGCAAGAATTTCTGACTTTGGATTAGCCAAGTTGTTGAACATGAATCAAAGCAAAACCAACACTGGCATAAGGGGAACAAAAGGTTATGTTGCACTTGAATGGTTTAAAAACATGCCTATCACTGCTAAGGTTGATGTGTATAGTTATGGTGTAGTGCTACTTGAGATAATTTCATGTAGAAAATGTGTTGAAGAAATGGATGAAGAAGATGAAGACAAAGCTATTTTAACTGATTGGGCTTATGATTGCTACAAAGATGGTGCTTTAGGTGCATTGGTTGAGGGTGACAAGGAGGCATCGGAGGACAAGGAAAATTTGGAGAAATTGGTAATGATTGCTATTTGGTGTGTTCAAGAGGATCCATGTCTTAGACCAAACATGAGAAATGTGGTACATATGCTTGAAGGTACTGTTGAAGTGCAAGTTCCACCATACCCCTCACAAATTAGTATACAATATTCTCTAAATTAA 1272 0.3758 MNFYCVGDSCWKKKLPLTNGKYDATLNGAKAFLKVRIDNTSILGVFPPNSTIVNKINNRETLVLVASVLLGSSTILNVVLIVAICVCTSIIFQYKKKLRRVSKSDTSVETNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINNDTTSKTCVAVKKLNSFLLDQAHREFRNELNVIGLTHHKNLVRLLGFCESGSERLLVYEYMSNSTLASFLFNEEKQKPSWKLRLELAIGIARGLVYLHEECITRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIRGTKGYVALEWFKNMPITAKVDVYSYGVVLLEIISCRKCVEEMDEEDEDKAILTDWAYDCYKDGALGALVEGDKEASEDKENLEKLVMIAIWCVQEDPCLRPNMRNVVHMLEGTVEVQVPPYPSQISIQYSLN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04502 423 Pfam Protein tyrosine and serine/threonine kinase 127 401 IPR001245 GO:0004672|GO:0006468
Mepo1g04502 423 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 206 409 - -
Mepo1g04502 423 Gene3D Phosphorylase Kinase; domain 1 88 205 - -
Mepo1g04502 423 Gene3D Transferase(Phosphotransferase) domain 1 206 409 - -
Mepo1g04502 423 ProSiteProfiles Protein kinase domain profile. 125 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04502 423 FunFam S-receptor-like serine/threonine-protein kinase 94 205 - -
Mepo1g04502 423 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 413 - -
Mepo1g04502 423 SUPERFAMILY Protein kinase-like (PK-like) 106 414 IPR011009 -
Mepo1g04502 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mepo1g04502 423 ProSitePatterns Protein kinases ATP-binding region signature. 131 158 IPR017441 GO:0005524
Mepo1g04502 423 SMART serkin_6 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04502 Mepo-Chr1 52777688 52780653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04502 111 413 Receptor kinase-like Gene Family AT1G60800 40.312 1.62e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo1g04502 PK_Tyr_Ser-Thr 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04502 - - mtr:11434023 636.336