Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04500 ATGCAGATGATGGAGGCAAGAAACGCATGTGAAACGACGAAGGTAATCGAAGAAAACGGTGAAAAAACGGCTACCAAAGCTGCACTGGAGGAACGAAATTTGACGCAAGAGTATACATTTATTCGAAACAAAATTGCAATTTTGCACATTTTGTTTGAAAGTGATAGTTGTTGGAAGAAGAAGTTACCACTCTCAAATGGGAGAGTTGATGCAACTCTAAATGGTGCTAAGGCTCTCTTGAAAGTGAGAAAAGAAGTGAACACGAATAATAATAATAATAACAATAGACAAACTTTGGTTTTGGTTGGTTCTGTGCTTTTTGGTAGCTCTGCTATTCTCAACGTTGTATTGATTGTAACAATCTGTGTCAGCACCTCCATTTTTCAGTACAAGAAGAAGCTTAGAAGAGATATCAAAAGTTACACGTGCGTTGAAATTCAATCCAATTTGTGTTGCTTCACTTATGAAGTGCTTGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTACGAAGGAGTCATCAACAACGACACAGCTTCCAAAACTCGGGTGGCAGTGAAAAAGTTAAACAGTTTTTTGTTGGATCAAGCTCATAGGGAATTCAGGAATGAGCTGAATTCCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGCGAGAGTGGAAGTGAAAGACTGCTTGTTTATGAGTACATGAGCAATAGCACTTTGGCAAGTTTTCTTTTCAATGCTGATGATGAGAAACAAAAACCAAGTTGGAAACTAAGGCTAGAACTTGCAATAGGGATAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATCACTCGGATCATCCATTGTGACATAAAGCCTCAGAACATACTCCTTGATGATTACTTCAATGCAAGAATTTCTGATTTTGGATTAGCCAAGTTGTTGAACATGAATCAAAGCAAAACCAACACTGGCATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTTAAAAACATGCCTATCACTGCTAAGGTGGATGTATATAGTTATGGTGTAGTGCTACTTGAGATAATTTCATGTCGAAGATGTGTTGAAGAAATGGATGAAGAAGATGTAGACAAAGCAATTTTAACTGATTGGGCTTATGATTGCTACAAAGATGGTGCTTTAGATGCATTGGTTGAAGGCGACATTGAGGCATTGGAGGACAAGGAAATGCTGGAGAAATTGGTAAAGATTGCTATTTGGTGTGTTCAAGAGGATCCATGTCTTAGACCAACCATGAGAAATGTGATACATATGCTTGAAGGTACTGTTGAAGTGCAAGCTCCGTTAAACCCCTCACCATTTAGTATTCAATATTCTCTAAATTAA 1392 0.3829 MQMMEARNACETTKVIEENGEKTATKAALEERNLTQEYTFIRNKIAILHILFESDSCWKKKLPLSNGRVDATLNGAKALLKVRKEVNTNNNNNNNRQTLVLVGSVLFGSSAILNVVLIVTICVSTSIFQYKKKLRRDIKSYTCVEIQSNLCCFTYEVLEEATNGFDKELGRGAFGIVYEGVINNDTASKTRVAVKKLNSFLLDQAHREFRNELNSIGLTHHKNLVRLLGFCESGSERLLVYEYMSNSTLASFLFNADDEKQKPSWKLRLELAIGIARGLVYLHEECITRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIRGTKGYVALEWFKNMPITAKVDVYSYGVVLLEIISCRRCVEEMDEEDVDKAILTDWAYDCYKDGALDALVEGDIEALEDKEMLEKLVKIAIWCVQEDPCLRPTMRNVIHMLEGTVEVQAPLNPSPFSIQYSLN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04500 463 Gene3D Transferase(Phosphotransferase) domain 1 244 450 - -
Mepo1g04500 463 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 453 - -
Mepo1g04500 463 Gene3D Phosphorylase Kinase; domain 1 124 243 - -
Mepo1g04500 463 SMART serkin_6 163 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04500 463 Pfam Protein tyrosine and serine/threonine kinase 165 441 IPR001245 GO:0004672|GO:0006468
Mepo1g04500 463 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 244 449 - -
Mepo1g04500 463 ProSitePatterns Protein kinases ATP-binding region signature. 169 196 IPR017441 GO:0005524
Mepo1g04500 463 ProSiteProfiles Protein kinase domain profile. 163 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04500 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Mepo1g04500 463 SUPERFAMILY Protein kinase-like (PK-like) 146 451 IPR011009 -
Mepo1g04500 463 FunFam S-receptor-like serine/threonine-protein kinase 131 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04500 Mepo-Chr1 52761507 52766090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04500 153 443 Receptor kinase-like Gene Family AT1G60800 41.017 2.45e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo1g04500 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04500 - - mtr:11434023 692.189