Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04486 ATGAACGACAGCAACATAAACCAAAACGACAGAGTAAAGTCACTAGATTTCAAAACCCTAAAAGTTATTTCCGCCGTAGGACGCGGCGCCAAAGGTGTCGTGTTCTTGGCAAAAACCGGTAACCGGTCATCAGAAGAATATATGGCTTTGAAAGTAATGTCGAAAGCTCTTATAGATCAGAAGAAATCAAAGATTCCTAAAGGCTGTGGCGAGTATAAGAGAGCGTCGTTTGAACAAGAAGTGCTACGTAGTTTTGATCATCCTCTTTTGCCACGGTTGCGAGGTGTTTTCGAAACAGAGAAGATTGTTGGATTCGCCATTGATTATTGCAATGGTGGTAACCTCCATTCTCTCAGAAAGAAACAATCCGAGAAAATGTTCTCCAATGACGCCATTAGGTTTTATGCTGCTGAAATGGTTCTGGCATTGGAGTATCTACACGATTTAGGAATAGTTTACAGAGATTTGAAGCCAGATAATGTGATGATTCAAGAAAATGGTCACATAATGCTCGTAGATTTCGATCTTTCTACAAAGCTGAAACCTATATCACCACCTCAATCACTGAGTCACAACTCGTCTTCAGAGAGATCGAATCCTTCCAAGGAAAAGCACACGAAGAATCGATTGTTCTCCCGGTTCTACCGTTGTAACTCAGGGATCTCACCGTGTGACTCAGATTTCCCTTCAACAGATTCCGGCTCATTCGAATGCAACGAGCCGGAATCGGTTGAAAAATCGAAGTCATTCGTTGGAACGGAAGAGTACGTGGCACCTGAAATTGTAAACGGAAAAGGTCACGGGTTTGAAGTTGATTGGTGGTCGTTAGGTGTTGTTTTATACGAGATGTTGTATGGTACGACGCCGTTTAATGGGACTAATAGAAAAGAAACGTTTTACAGGATTTTGTCAAAGGAACCTGAGTTAACGGGAGAGAAAACAGCGTTAAGGGATTTGATTAGGAGATTGTTGGAAAAGGATCCTGACCGTAGGATTAAGGTGGATGAAATCAAGGGTCATGATTTCTTTAAAGGAGTAAAGTGGGACACGGTTTTGGAATTGGCAAGACCACCTTATATTCCTCCACTAATTGAAGCTGAGAATGAGAATAATAAGGGGTATAGTAGAAATTATGTGGAGGTATTTGTTCATGAGGTATTTTTTCCTGAGAGTGATGATGATAATGAAGAGAAAAAGAAGAATAAAATGGAGGAAAAGAAGGAAAAAAAAGTGTGGGTTGATAAGTTGAGTAGTAGTCTCAATGAGAATGAGGATTTTTTGATTTTTTGA 1290 0.4031 MNDSNINQNDRVKSLDFKTLKVISAVGRGAKGVVFLAKTGNRSSEEYMALKVMSKALIDQKKSKIPKGCGEYKRASFEQEVLRSFDHPLLPRLRGVFETEKIVGFAIDYCNGGNLHSLRKKQSEKMFSNDAIRFYAAEMVLALEYLHDLGIVYRDLKPDNVMIQENGHIMLVDFDLSTKLKPISPPQSLSHNSSSERSNPSKEKHTKNRLFSRFYRCNSGISPCDSDFPSTDSGSFECNEPESVEKSKSFVGTEEYVAPEIVNGKGHGFEVDWWSLGVVLYEMLYGTTPFNGTNRKETFYRILSKEPELTGEKTALRDLIRRLLEKDPDRRIKVDEIKGHDFFKGVKWDTVLELARPPYIPPLIEAENENNKGYSRNYVEVFVHEVFFPESDDDNEEKKKNKMEEKKEKKVWVDKLSSSLNENEDFLIF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04486 429 ProSiteProfiles Protein kinase domain profile. 20 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04486 429 FunFam Serine/threonine-protein kinase OXI1 245 362 - -
Mepo1g04486 429 FunFam Serine/threonine-protein kinase OXI1 114 182 - -
Mepo1g04486 429 PANTHER FLIPPASE KINASE 1-RELATED 6 369 - -
Mepo1g04486 429 MobiDBLite consensus disorder prediction 184 206 - -
Mepo1g04486 429 SUPERFAMILY Protein kinase-like (PK-like) 21 371 IPR011009 -
Mepo1g04486 429 Gene3D Transferase(Phosphotransferase) domain 1 238 362 - -
Mepo1g04486 429 Gene3D Transferase(Phosphotransferase) domain 1 114 181 - -
Mepo1g04486 429 SMART serkin_6 20 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04486 429 Pfam Protein kinase domain 22 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04486 429 Pfam Protein kinase domain 245 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04486 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Mepo1g04486 429 Gene3D Phosphorylase Kinase; domain 1 21 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04486 Mepo-Chr1 52616122 52617920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04486 13 429 AGC Kinase Gene Family AT3G25250 55.556 3.98e-151 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo1g04486 Pkinase 1.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04486 K20714 - gmx:100785773 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01285 3 19307163 19309176 Mepo1g04486 1 52616122 52617920 PCT