Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g04474 | ATGTCTTCTTCCTCTGATCATCCACGGATCTACGACGTGTTCATAAGTTTTAGAGGAGTGGATACTCGTCCCAACATTGTTTCTCATCTCTATGCTGCACTAAAAAATTCTGGAGTCAACACTTTTCTCGATAATGAGATGCTTAGAAAGGGAGAGGAGCTGGGAGCAGCACTAAAGAGAGCAATAGAAGATTCACAGATATCTATGCAGAATCTAGCTGGTACAATAGTCACACATAGGGGGATACAAATAAAAGAAATTCTCATGCCCAAGTGGAGGAGCGCACTCACCCAAGGAACAGAAACTGTTGAGGGATTGATTTTGAAGTTCCAAAGAACAGGCAGAATTAGCTTCGACACTAATGCTTTCCAGGAGATGAAAAAACTGAGGCTTTTAAAACTTGAAGGTGTTGACCTCATCGGAGATTATGGATATATTTCCAAACAACTGAGATGGATTGATTGGCAACGGTTTACCTTCAACTTCATACCCAATGACTTTGATCAAGGAAATCTCATTGTTTTTGAATTAAAGTATAGCAACGTTAAGCAAGTTTGGCAGGAGACTAAGTCATGA | 576 | 0.401 | MSSSSDHPRIYDVFISFRGVDTRPNIVSHLYAALKNSGVNTFLDNEMLRKGEELGAALKRAIEDSQISMQNLAGTIVTHRGIQIKEILMPKWRSALTQGTETVEGLILKFQRTGRISFDTNAFQEMKKLRLLKLEGVDLIGDYGYISKQLRWIDWQRFTFNFIPNDFDQGNLIVFELKYSNVKQVWQETKS | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g04474 | 191 | Pfam | TIR domain | 11 | 68 | IPR000157 | GO:0007165 | |
Mepo1g04474 | 191 | SMART | till_3 | 10 | 139 | IPR000157 | GO:0007165 | |
Mepo1g04474 | 191 | ProSiteProfiles | TIR domain profile. | 9 | 181 | IPR000157 | GO:0007165 | |
Mepo1g04474 | 191 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 90 | 185 | IPR044974 | GO:0006952 | |
Mepo1g04474 | 191 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 2 | 68 | IPR035897 | - | |
Mepo1g04474 | 191 | Gene3D | - | 3 | 80 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g04474 | Mepo-Chr1 | 52522679 | 52526572 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g04474 | 99 | 191 | WRKY Transcription Factor Family | AT4G12020 | 30.097 | 7.27e-09 | 52.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g04474 | - | - | tpra:123923859 | 154.836 |