Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04474 ATGTCTTCTTCCTCTGATCATCCACGGATCTACGACGTGTTCATAAGTTTTAGAGGAGTGGATACTCGTCCCAACATTGTTTCTCATCTCTATGCTGCACTAAAAAATTCTGGAGTCAACACTTTTCTCGATAATGAGATGCTTAGAAAGGGAGAGGAGCTGGGAGCAGCACTAAAGAGAGCAATAGAAGATTCACAGATATCTATGCAGAATCTAGCTGGTACAATAGTCACACATAGGGGGATACAAATAAAAGAAATTCTCATGCCCAAGTGGAGGAGCGCACTCACCCAAGGAACAGAAACTGTTGAGGGATTGATTTTGAAGTTCCAAAGAACAGGCAGAATTAGCTTCGACACTAATGCTTTCCAGGAGATGAAAAAACTGAGGCTTTTAAAACTTGAAGGTGTTGACCTCATCGGAGATTATGGATATATTTCCAAACAACTGAGATGGATTGATTGGCAACGGTTTACCTTCAACTTCATACCCAATGACTTTGATCAAGGAAATCTCATTGTTTTTGAATTAAAGTATAGCAACGTTAAGCAAGTTTGGCAGGAGACTAAGTCATGA 576 0.401 MSSSSDHPRIYDVFISFRGVDTRPNIVSHLYAALKNSGVNTFLDNEMLRKGEELGAALKRAIEDSQISMQNLAGTIVTHRGIQIKEILMPKWRSALTQGTETVEGLILKFQRTGRISFDTNAFQEMKKLRLLKLEGVDLIGDYGYISKQLRWIDWQRFTFNFIPNDFDQGNLIVFELKYSNVKQVWQETKS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04474 191 Pfam TIR domain 11 68 IPR000157 GO:0007165
Mepo1g04474 191 SMART till_3 10 139 IPR000157 GO:0007165
Mepo1g04474 191 ProSiteProfiles TIR domain profile. 9 181 IPR000157 GO:0007165
Mepo1g04474 191 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 90 185 IPR044974 GO:0006952
Mepo1g04474 191 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 68 IPR035897 -
Mepo1g04474 191 Gene3D - 3 80 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04474 Mepo-Chr1 52522679 52526572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04474 99 191 WRKY Transcription Factor Family AT4G12020 30.097 7.27e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04474 - - tpra:123923859 154.836