Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04470 ATGCTTCGATTTCTTTCAAATGGGTCAAAAAAATTTCACCATTTTACATTCACCACAGCAATTAAAAAAGTTTTCCCAGTTTTTACGCCTGCCACCTATTCGACGAAAGTTCCAGCTCAAAATGAGGTTGAATTGCAAAATGTTAAAGACAAATGGAAGGATGCTACTGAAGTTTTGAGTAAATGGGGTTGTGGTGATGACGATTTGACGAGAATATTCACTCGTTGCCCGTCTTTGCGCAATGCGGATCCTTCTCAGGTTCAGTCTAAACTTCGCTTGCTTAGTGATTTGGGTTTAGGGTCAGCTGAGCTTGTAAAGATTATCAATTGTAGGCCTCGATTTTTCAGGACTCGGCTTAACCATAATTTCGACGAGAGGCTTGACTCTCTTATGTCATTGTTTGAGTCAAAGGAAATGCTTCATAAGGCCATTGCAAGAAACCCTTCATTGCTGTGTGAAAATAGTTATGACATTAAACGTATTGTTGCACAATATGAAGAGTTAGGTATACCGAAAAGGGACTTGGTTCAAATGATTATCTTGCGACCGACTGTTATTTCGAGAACTTCCTTTGACGATGAGAAGATGGAATATATAAGTAGGATTGGACTTTCGAAGGATTCGAAATTGTACAAATATGTGGTGACATTAATAGGCATCTCTCGTGTGGAAACAATTCGCGAGAAGGTGTTGAATTTTACAAAGTATGGTTTTTCCGATGATGAGGTATTCGGTCTTTTTGGGAAGTCTCCTAATATTTTGACATTGTCAACTGATAAGGTTCAAAGGAATATGACTTTCATTTTAGGCACGATGAAGCTTGAAGCTAACATAATCTTTAAGTACCCATATCTGTTGTTTTCAAATATGGAGACTGTTTTGAAGCCAAGAGTGCTTCTAGCAATGAAGGTACAGAATATGGATTCTAATATGAAAACACCCTCAATACTTAGAGCATTGAGGATGTCCGAGGAGAGGTTTTTCAATACGTTTGTCAAATGCCATGATAAGGAAATTGCTGACGAGTTAATGGAATTTTATAAAAGGACAAAACAGGTCAAGAGATTAGCAGTTTCATCAAGGAATTGGACTACTAGAGGATTCCCTTTCTGA 1113 0.3792 MLRFLSNGSKKFHHFTFTTAIKKVFPVFTPATYSTKVPAQNEVELQNVKDKWKDATEVLSKWGCGDDDLTRIFTRCPSLRNADPSQVQSKLRLLSDLGLGSAELVKIINCRPRFFRTRLNHNFDERLDSLMSLFESKEMLHKAIARNPSLLCENSYDIKRIVAQYEELGIPKRDLVQMIILRPTVISRTSFDDEKMEYISRIGLSKDSKLYKYVVTLIGISRVETIREKVLNFTKYGFSDDEVFGLFGKSPNILTLSTDKVQRNMTFILGTMKLEANIIFKYPYLLFSNMETVLKPRVLLAMKVQNMDSNMKTPSILRALRMSEERFFNTFVKCHDKEIADELMEFYKRTKQVKRLAVSSRNWTTRGFPF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04470 370 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 FunFam Mitochondrial transcription termination factor family protein 123 341 - -
Mepo1g04470 370 Gene3D Transcription termination factor 3, mitochondrial 120 346 IPR038538 -
Mepo1g04470 370 PANTHER CGI-12 PROTEIN-RELATED 48 336 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 Pfam mTERF 57 185 IPR003690 GO:0003690|GO:0006355
Mepo1g04470 370 Pfam mTERF 193 327 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04470 Mepo-Chr1 52472708 52474069 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo1g04470 mTERF 5.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04470 K15032 - gmx:100799629 468.774