Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04467 ATGGAAAACCAATTCTTTTTAAATGCTGGATTTGAACCTTACCAAACCCAAGATTGTTTTTTCAACCCAAATTGGGACAAGTCAACGGACCAAAACCTTAACTTTGATTCAGCACTTAGTTCAATTGTCTCATCCCCAGCAGCTACATCATCACCACCAAATCCCAACAATATGTCCAATGAAAATTTTGTGATGAGAGAATTAATAGGAAAATTGGGAACTTTTGGTGAGATCTCACAACATTCTTCTAACCCTTTGGTTGTACCAATGATGCAAAAACCAATGTCTAGTGTGGCAGAATTTTCACCTGATCCTGGTTTTGTTCAAAGGGCTGCGAAATTCTCTTGCTTTGGTAGCAAGAGTTTCAATGAGAGAGGTAACCAAATGGTGATGAACAATGTTGAATTAGCTCAAAGATCTCATACTTTAATGGAAAATGGAATGAAGTTATCAAGAGTTTCAAGTAGTCCATCACTCAAAACATTTGGATCTCAAATGGTTAACCATGACAACAAGAATTCTCCATTGCAACAAGAAAATGATAGAATGGAAGTGGCTAATTCACAAGAGGAATCTACAATATCTGAGCAAAATACACCAAATGGTGAAATTGGTGTGAAAGCTTCACCTGATATGAATTCAAGGAAAAGAAAACCTTCTTCTTCCAAAGGAAAAGCACCAAACTCTTCCAATCCTACAAAGGGTGTAGAAGGTAGTGGTGAAGACTTAAATGCAAAGAAAATTAAGGCAAGTGAGGGTGAGAGAAATGAATATGGTGTCAGGGATATGGAGGAAGAGACCAAAGAAGGTACTACAAATGCAGGGGAAGAGAAACAGAACAAGAGTGACTCAAAACCTCCTGAACCTCAAAAAGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGACAGTCACAGTCTTGCAGAACGAGTTAGGAGGGAGAAAATTAGTGAGAGGATGAAACTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTTACTGGAAAAGCACTTATGCTTGATGAAATTATAAATTATGTTCAGTCATTGCAGCGTCAAGTTGAGTTTTTGTCTATGAAATTGTCTTCAGTGAACACAAAGATGGATTTAAGTATTGAAAGTCTTGTTGTATCAAAAGATATATTTCAATCAAATAATTCTTTGCAAAACTCAATATTCCAATTAGATTCCTCAGTACCATCCTTTTATGGGCAACAACCCCAGCAAAACCAAGCTATTCATAATAACATTCCTAATACAAATGGGTCCCACTGCTCAGTGGAACCACTGGATTCTTCTTTGTGCCATAACATTGGCATGCATTTACCTTTCCTAAATGGATTTAATGAAGGTGGCTCTCAGTATCCATTAACATTCTCTGAGGAGGACTTAAACACCGTTGTTCAGATGGGATTTGGCCAAACTTCAAACAGGAATACACCAATACACTCCCCAAGTTTCAACGGTTCAAATCAAGCAACACAAATGAAAATTGAGCTTTAA 1509 0.3751 MENQFFLNAGFEPYQTQDCFFNPNWDKSTDQNLNFDSALSSIVSSPAATSSPPNPNNMSNENFVMRELIGKLGTFGEISQHSSNPLVVPMMQKPMSSVAEFSPDPGFVQRAAKFSCFGSKSFNERGNQMVMNNVELAQRSHTLMENGMKLSRVSSSPSLKTFGSQMVNHDNKNSPLQQENDRMEVANSQEESTISEQNTPNGEIGVKASPDMNSRKRKPSSSKGKAPNSSNPTKGVEGSGEDLNAKKIKASEGERNEYGVRDMEEETKEGTTNAGEEKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIFQSNNSLQNSIFQLDSSVPSFYGQQPQQNQAIHNNIPNTNGSHCSVEPLDSSLCHNIGMHLPFLNGFNEGGSQYPLTFSEEDLNTVVQMGFGQTSNRNTPIHSPSFNGSNQATQMKIEL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04467 502 FunFam Basic helix-loop-helix transcription factor 299 371 - -
Mepo1g04467 502 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 178 423 IPR024097 GO:0006355
Mepo1g04467 502 MobiDBLite consensus disorder prediction 240 290 - -
Mepo1g04467 502 MobiDBLite consensus disorder prediction 153 204 - -
Mepo1g04467 502 MobiDBLite consensus disorder prediction 153 290 - -
Mepo1g04467 502 MobiDBLite consensus disorder prediction 479 502 - -
Mepo1g04467 502 CDD bHLH_AtBPE_like 292 377 - -
Mepo1g04467 502 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 352 IPR011598 GO:0046983
Mepo1g04467 502 SMART finulus 308 358 IPR011598 GO:0046983
Mepo1g04467 502 Coils Coil 349 369 - -
Mepo1g04467 502 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 300 371 IPR036638 GO:0046983
Mepo1g04467 502 Gene3D - 299 374 IPR036638 GO:0046983
Mepo1g04467 502 Pfam Helix-loop-helix DNA-binding domain 306 353 IPR011598 GO:0046983
Mepo1g04467 502 MobiDBLite consensus disorder prediction 223 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04467 Mepo-Chr1 52435501 52439145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04467 1 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 41.247 2.62e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g04467 HLH 3.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04467 - - gmx:100801233 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01297 3 19455214 19458707 Mepo1g04467 1 52435501 52439145 PCT