Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04465 ATGGGTATTTCACGAGATTCTATGCACAAGAGACGTGAAACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTCGGTCGCCAGCCAGCTAACACAAAACTATCAAGCAACAAGACAGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTGAAGTGGAGAGCCCTGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCCGTCACTCGCAAAACCCGTTTGCTTGATGTGGTGTACAATGCTTCCAACAATGAGTTGGTGCGAACTCAGACTCTTGTGAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAACACTATGGTGTTGATATCGGTAGGAAGAAGAAAAATGTTAGCAAGAAAGAAGAGGAGGCTGAGGCTGCTACAGAAGAAGTCAAAAAGAGTGCCCACGTGCAGAGAAAATTAGAGCAACGCCAGAAAGAACGCCAGCTTGATGCCCATATTGAGGAGCAGTTTGGTGGTGGACGATTACTTGCATGCATTTCTTCTCGACCTGGTCAATGCGGCAGAGCTGATGGCTACATCCTTGAAGGTAAGGAGCTAGAATTCTACATGAAGAAACTCCAGAAGAAGAAGGGCAAGGGTGCCGCTTGA 648 0.4707 MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKNVSKKEEEAEAATEEVKKSAHVQRKLEQRQKERQLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04465 215 CDD Ribosomal_S8e_like 5 194 - -
Mepo1g04465 215 PANTHER 40S RIBOSOMAL PROTEIN S8 1 212 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mepo1g04465 215 Gene3D Ribosomal protein S8e, subdomain 113 173 IPR042563 -
Mepo1g04465 215 Gene3D - 26 112 - -
Mepo1g04465 215 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Mepo1g04465 215 Pfam Ribosomal protein S8e 5 194 IPR022309 -
Mepo1g04465 215 FunFam 40S ribosomal protein S8 32 158 - -
Mepo1g04465 215 Coils Coil 122 142 - -
Mepo1g04465 215 FunFam 40S ribosomal protein S8 109 173 - -
Mepo1g04465 215 NCBIfam ribosomal protein eS8 1 196 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mepo1g04465 215 MobiDBLite consensus disorder prediction 1 35 - -
Mepo1g04465 215 FunFam 40S ribosomal protein S8 159 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04465 Mepo-Chr1 52415797 52418500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04465 1 203 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.714 2.95e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04465 K02995 - qsu:111988287 346.665