Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04464 ATGGACGAAGATTTCGATATTCCGGCCGTTGATTCCATGAACGACGATTTCGACTTCGCCGGCGCCGGCGATAATCCAATTCTCAAGGTCGGCGAAGAGAAGGAAATCGGAAAGCAAGGTTTGAAGAAGAAGCTTCTCAAAGAAGGTGAAGGTTGGGATACTCCTGATGTTGGCGATGAAGTTCACGTTCATTATACTGGAACGTTGCTTGATGGTACGAAGTTTGATTCTAGCAGAGATAGAGGAACTACTTTCAATTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATGAAGGCATTAAAACCATGAAGAAAGGTGAAAATGCTCTTTTTACCATTCCACCTGAGTTAGCTTATGGTGAATCTGGTTCTCCTCCAACTATTCCTCCTAATGCTACTCTGCAATTTGATGTTGAGCTGCTGTCTTGGACTAGTGTGAAGGATATATGTAAAGATGGAGGATTGTTTAAGAAGATAGTTAAGGAGGGGGAGAAATGGGAAAACCCCAAGGATCTTGATGAAGTATTAGTTAAGTATGAAGCGCGTCTTGATGATGGAACACTAGTAGCAAAATCTGATGGAGTGGAGTTCACAGTGAAGGAGGGTTATTTTTGTCCTGCATTGTCAAAGGCTGTTAAGACTATGAAGAAGGGAGAGAAAGTGATCTTGACTGTGAAGCCACAATATGGATTTGGTGAGAAAGGCAAACCAGCTCATGGTGATGAAGCTGCAGTTCCACCTAATGCAACATTGGAGATTACCCTTGAGTTAGTTTCTTGGAAGACTGTTTCCGAAGTAACTGATGACAAGAAGGTTATCAAGAAGATTGTCAAGGAAGGAGAAGGATATGAGCGTCCAAATGATGGAGCTGTTGTAAAATTGAAACTAATTGGTAAGTTGCAAGATGGCACTGTATTTTTGAAGAAGGGCCACACCGATGATGAAGCAGAGCTATTTGAATTCACAACAGATGAGGAGCAAGTGATTGATGGGCTCGATAGAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCATTGTTGACTATTGCACCGGAGTATGCTTTTGGTTCATCCGAGTCTCGGCAGGAATTGGCAGTGGTCCCTCCTAATTCAACCTTGAATTATGAGGTTGAGTTAGTATCATTCATAAAGGATAAGGAGTCATGGGACATGACAACTGGAGAGAAGGTAGAAGCTGCAGGTAAGAAGAAAGAAGAAGGGAATGCTTTGTTCAAAACTGGGAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTGTGAAATTCATAGAGTATGATACTTCCTATACCGAAGAGCAGAAGAAAAGTGCCAAGGTCTTGAAAGTTGCTTGTAATCTGAACGATGCAGCATGCAAGCTGAAGTTGAAAGACTATAAACAGGCAGAGAAATTGTGCACGAAGGTGCTGGAGCTTGAGAGCACAAATGTTAAGGCCCTCTATAGAAGGGCTCAGGCATATATTCAGTTGGCTGACTTTGATTTGGCTGAATTTGATATCAAGAAAGCTCTTGAGATTGACCCTAACAACAGGGATGTGAAGTTGGAGTACAAGACTTTGAAGGAAAAGGTGAAGGAGATCAATAAAAAGGATGCAAAGTTCTATGGGAACATGTTCAGTAAAATGACGAAGTTGGATTCTCTTGACATTAATAAATCGGCGCCAAAGGATGCTGAGCCCATGAGTATTGACAGCAAGGCATAG 1728 0.4201 MDEDFDIPAVDSMNDDFDFAGAGDNPILKVGEEKEIGKQGLKKKLLKEGEGWDTPDVGDEVHVHYTGTLLDGTKFDSSRDRGTTFNFTLGQGQVIKGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKIVKEGEKWENPKDLDEVLVKYEARLDDGTLVAKSDGVEFTVKEGYFCPALSKAVKTMKKGEKVILTVKPQYGFGEKGKPAHGDEAAVPPNATLEITLELVSWKTVSEVTDDKKVIKKIVKEGEGYERPNDGAVVKLKLIGKLQDGTVFLKKGHTDDEAELFEFTTDEEQVIDGLDRAVMTMKKGEVALLTIAPEYAFGSSESRQELAVVPPNSTLNYEVELVSFIKDKESWDMTTGEKVEAAGKKKEEGNALFKTGKYAKASKRYEKAVKFIEYDTSYTEEQKKSAKVLKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYIQLADFDLAEFDIKKALEIDPNNRDVKLEYKTLKEKVKEINKKDAKFYGNMFSKMTKLDSLDINKSAPKDAEPMSIDSKA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04464 575 FunFam Peptidylprolyl isomerase 31 149 - -
Mepo1g04464 575 FunFam Peptidylprolyl isomerase 150 263 - -
Mepo1g04464 575 Gene3D - 264 387 IPR046357 GO:0003755
Mepo1g04464 575 Gene3D Tetratricopeptide repeat domain 388 545 IPR011990 GO:0005515
Mepo1g04464 575 SUPERFAMILY FKBP-like 35 150 - -
Mepo1g04464 575 FunFam Peptidylprolyl isomerase 390 545 - -
Mepo1g04464 575 PANTHER PEPTIDYLPROLYL ISOMERASE 33 147 - -
Mepo1g04464 575 SUPERFAMILY TPR-like 390 550 IPR011990 GO:0005515
Mepo1g04464 575 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Mepo1g04464 575 Coils Coil 518 538 - -
Mepo1g04464 575 Pfam Tetratricopeptide repeat 485 518 IPR001440 GO:0005515
Mepo1g04464 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 58 146 IPR001179 GO:0003755
Mepo1g04464 575 Gene3D - 150 263 IPR046357 GO:0003755
Mepo1g04464 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 143 IPR001179 GO:0003755
Mepo1g04464 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 285 382 IPR001179 GO:0003755
Mepo1g04464 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 169 260 IPR001179 GO:0003755
Mepo1g04464 575 FunFam Peptidylprolyl isomerase 264 387 - -
Mepo1g04464 575 SMART tpr_5 485 518 IPR019734 GO:0005515
Mepo1g04464 575 SMART tpr_5 451 484 IPR019734 GO:0005515
Mepo1g04464 575 SMART tpr_5 402 435 IPR019734 GO:0005515
Mepo1g04464 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 385 IPR001179 GO:0003755
Mepo1g04464 575 SUPERFAMILY FKBP-like 149 266 - -
Mepo1g04464 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 174 263 IPR001179 GO:0003755
Mepo1g04464 575 SUPERFAMILY FKBP-like 268 402 - -
Mepo1g04464 575 Gene3D - 33 149 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04464 Mepo-Chr1 52395459 52400049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04464 1 550 Calmodulin-binding Proteins AT3G25230 80.909 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04464 K09571 - gmx:100803189 963.755