Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04458 ATGGAAAGGTATAAAATTTTGAATGAGCTTGGCGATGGTTCTTGCGGTCATGTATATAAAGCCCGTGATATGAGAACTTTTGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGCTTTTGGGAAGAATATACAAATTTAAGAGAAATAAAGGTCCTCCGTAAAATGAATCACCCAAATATCATAGAGTTGAGAGAGGTTGTTAGAGAAAATAACGAGCTGTTTTTCATTTTTGAATACATGGATTGCAATCTTTATCAATTAATAAAAGAGAGAGAAAAACCCTTTTCAGAGGAAGAGATACGATGCTTTATGAAGCAAATGCTCCAAGGACTTAGTCACATGCACAAAAAAGGATTTTTTCACCGGGATTTAAAACCTGAAAATTTGCTGGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGTTTGGCTAGAGAAGTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGATGGTACCGAGCACCTGAAGTTTTGTTGCAGTCCCCATGCTATACTCCTGCTGTTGACATGTGGGCTATTGGTGCTATATTGGCTGAGCTTTTTACATTGACCCCCATATTTCCTGGTGAAAGTGAAATAGATCAAATGTACAAAATTTACTGCATTCTTGGTATGCCAGATTCAACTTGTTTCACCATAGGTGCGAACAACTCTAGGCTATTGGACCTTGTTGGCCATGAAGTGGTTCCGCCTGTGAAGCTTTCTGATATCATTCCAAATGCTAGCATGGAAGCTATAGATTTGATCACTCAATTATTATCATGGGACCCATCAAGAAGGCCAGATGCGGATCAGTCACTGCAGCATCCTTTTTTCCATGTGAATACAAGGGTTCCTCGTTCACTCAGCGATCCACTTGAGCTGAAGCTGAGTAACAAAAGGGTAAAGCCAAATCTTGAGCTGAAGCTGCATGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACATTGGCTGTAAAGCCCAGTGTTTCTAACTTGGATGTGGTTCAAAATGCACGGCGAGAGAATATGCTATTTTGCTCGGATTTTAATGACCATTCAGACCAATCAGTTTTTTGGACATTGTTATCTCCTGATCAAAATGGAGTTCACAGCTCAGCAGAGACTTCATTATCATTGTCATTCGGATCTGTTCAACACCAGCCAATTGGAGTTCCACAGACAGCAGGATTTTCTTTTCAACCTTTGCAGCCTAACATCTTAACGACACCATTTTTGACACTGTCTTCTGCGTACCAGCGCGGGCATTGCCTTTGA 1299 0.4003 MERYKILNELGDGSCGHVYKARDMRTFEIVAVKRLKRKFCFWEEYTNLREIKVLRKMNHPNIIELREVVRENNELFFIFEYMDCNLYQLIKEREKPFSEEEIRCFMKQMLQGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAIGAILAELFTLTPIFPGESEIDQMYKIYCILGMPDSTCFTIGANNSRLLDLVGHEVVPPVKLSDIIPNASMEAIDLITQLLSWDPSRRPDADQSLQHPFFHVNTRVPRSLSDPLELKLSNKRVKPNLELKLHDFGPDPDDCFLGLTLAVKPSVSNLDVVQNARRENMLFCSDFNDHSDQSVFWTLLSPDQNGVHSSAETSLSLSFGSVQHQPIGVPQTAGFSFQPLQPNILTTPFLTLSSAYQRGHCL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04458 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Mepo1g04458 432 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Mepo1g04458 432 CDD STKc_MAK_like 4 284 - -
Mepo1g04458 432 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04458 432 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04458 432 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Mepo1g04458 432 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04458 432 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 292 - -
Mepo1g04458 432 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Mepo1g04458 432 Gene3D Transferase(Phosphotransferase) domain 1 82 284 - -
Mepo1g04458 432 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04458 Mepo-Chr1 52335199 52344608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04458 1 310 Core Cell Cycle Gene Families AT1G66750 38.080 1.43e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Mepo1g04458 Pkinase 5.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04458 K08829 K08830 gmx:100792842 795.808