Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04422 ATGGCTGTTCCAAAAGTGAATGAAAAGTTGCTTGAAGACCTTGAAGAAATGGGATTTCCACATGCAAGGGCAACAAGAGCACTTTATTACTCTGGCAACACCAGCTTAGAGGATGCTATAACTTGGATGGTTGATCATGAGAATGACACAGATATTGATGAGATTCCATTGGTAGATGTAGACATTGATATCGATACCTCTCCGTCATTCCCTATCACAGAAGAAATGAGAACGAAAGCACGGTATTTAAGGGAACAAGTGCGCGAGAGGAAAAAGAATGAAGAAAAAATAATGGAAAGAGAAAGGGAAAAGGAGAGGATTCAATCAGGTAAGAAACTCCTTGAGGCAAAGCGGATTGCTGAAGAAAATGAAAGAAAAAGGAATTTATCCTTGAGAAAAGCAGAAAAAGAAGAAGAACAAAGAGCTAGGAGTAACATCCTCAAGAAACTAGAGCAGGATAAGTTAAATAGAAGGTCTATACTTGGATTACCTTTAGAAAGCCAAGCAAATGTGAGATCACCAGCCATTCTGATAAAGGAAGAAAAGATTTCAAAGCCTGTTTATACAACCACAAAAGTTGAGCACTTGAGAGAATGTTTGAGGTCTCTCAAACGTGAACACAAGGGTGAGAATGCAAGAATCAGAAGGGCCTTTGAAACACTTCTAGTGTATGTTGGAAATGTTGTCAAGAATCCTAAGGAAGAAAAATACAGGAAGATTAGACTGAGCAATCCATTATTCCAAGATAGAGTTGGAAGTTTAGATGGAGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAACTGGTGATTTCTTGTATCTTCCTAGTGAAAAGGTTGACATGGAACTACTGAGTTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAATCCTTACTTTGGACTTTTAAGTACTTGCTAA 924 0.382 MAVPKVNEKLLEDLEEMGFPHARATRALYYSGNTSLEDAITWMVDHENDTDIDEIPLVDVDIDIDTSPSFPITEEMRTKARYLREQVRERKKNEEKIMEREREKERIQSGKKLLEAKRIAEENERKRNLSLRKAEKEEEQRARSNILKKLEQDKLNRRSILGLPLESQANVRSPAILIKEEKISKPVYTTTKVEHLRECLRSLKREHKGENARIRRAFETLLVYVGNVVKNPKEEKYRKIRLSNPLFQDRVGSLDGGVEFLELCGFERTGDFLYLPSEKVDMELLSSAGFVLNSAMTNPYFGLLSTC 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04422 307 Gene3D - 8 53 - -
Mepo1g04422 307 Pfam PUB domain 214 281 IPR018997 -
Mepo1g04422 307 SUPERFAMILY UBA-like 5 56 IPR009060 GO:0005515
Mepo1g04422 307 Gene3D - 193 294 - -
Mepo1g04422 307 SMART PGNneu 216 277 - -
Mepo1g04422 307 Coils Coil 83 108 - -
Mepo1g04422 307 Coils Coil 119 153 - -
Mepo1g04422 307 CDD UBA_PUB_plant 6 53 - -
Mepo1g04422 307 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Mepo1g04422 307 SUPERFAMILY PUG domain-like 190 300 IPR036339 -
Mepo1g04422 307 PANTHER F13M7.16 PROTEIN 1 304 - -
Mepo1g04422 307 Pfam UBA/TS-N domain 7 42 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04422 Mepo-Chr1 51822901 51826502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04422 1 304 C2H2 Transcription Factor Family AT1G04850 57.143 3.86e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04422 - K24348 gmx:100781260 458.759