Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04414 ATGACAATTAAGAAATTTTTCCGGAGACATTATTCAGCTAGTCTTGAAAGATTGGATGCACCAGAAGTTTTTATTTGGTATGATAAGAAAATTCATTGGAGAACTGGTCCATGGAATGGAAGGGTTTTTCTCGGAATACCTGGAATATCAACAGAGTATTTATACGGTTGGCGTTTTGTTCAAGACGATGATGGAACTAATTATATTACTTACAATTTAGCCGGCCAAACTATGTTTGGAATTCTCTCATTGACACCACATGGAACACTTAAGATTGTTGCGTATGTGAATAAAAAGGAATTTCTTAGACTTGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGACCATTTGGGTGTTGTGATAATTCTAGTGTGCCAATTTGTAGTTGTTTTGATGGGTTTGAGCCAAAGAATTCTGTCAAATGGAGTTCAAGGAATTGGACTAATGGCTGTGTGAGGACAGCAGGAATGAACTTAAAGTGTGAGATGATGAAGACCGGATCAAATGAATTTAAACAAGATGGATTTTTGGTGAATCGCAATATGAAAGTTCCTGATTTTGTTGAGAGATCAGATGGTGATCAAGATAACTGTGGAGCAGGTTGTTTGGCAAATTGTTCTTGTTTGGCATATGCATATGATCCTTCTATAGGTTGTATGTATTGGAGTAGCGAGTTAATTGATTTGCAGAAATTTCCTTCTGGAGGAGTTGATCTCTTCATTCGTGTGCCGGCAGAAATTTTGAGTCTTGGGGTTGATAAAAATGAATGTGATTTTTATGGAAAATGTGGGCCATTTGGAAACTGTGATAATTCTAGTATACCAATTTGTAAATGTTTGGAGGGGTTTGAGCCAAAGAATTTGGAGGAGTGGAATTTGACAAATTGGACTAATGGTTGTGTTATGAAGGAAGAATTGAACTTGAAGTGTAAGATTTTGAAGAATGGATCAAATGAAGTTCTACAAGAAGGATTTAAGGTGTACCATAATATGAAAGTTCCTTATTTTGCTGAGAGATCATATGGTAATAAAGATAAATGTGGAACAGATTGTTTGGCAAATTGTTCTTGTTTGGCATATGCATATGATTCTTCTATAGGTTGTGTGCATTGGAGTGGAGACTTAATTGGTTTGCAGAACTTTCCCCATGTAGGAGTTGATCTCTTCATCCGTGTTCCTGTAGAACTTGTTAAAAAGGAAAAGGGTCACAAGAAGGGTTTTTTAATCATATCAATTGCTGGGGGCATAGGAGCATTTACTTTGGTTATATGTGCTTATCTTTTGTGGCGGAGACGTTCTGCTAGGCATAAAGGGAGAAAATGTCAAAACTTGACTACTAGAGAACGTAACCAAATGAAATTGGATGAGCTACCACTATATGATTTTGAAAAGCTTGAAACTGCTACAAACAGTTTTGACGTTGGTAATATGCTTGGAAAAGGAGGCTTTGGCCCTGTATACAAGGGATTATTGGAAGATGACCAAGAAATTGCCGTGAAAAGACTCTCAAAGGCATCAGGACAAGGAATAGAAGAATTCATGAACGAAGTAGTAGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTTCTAGGTTGTTGTGTTGAAAGAGGAGAGCAAATGTTGGTTTATGAGTTCATGCCAAATAAAAGTTTGGATGCCTTTCTCTTTGATCCACTGCAAAAGAAAAAGTTAGATTGGAGAAAGCGGTCGAATATAGTTGAAGGAATAGCTCGAGGGATAATGTATCTTCATAGAGACTCGAGACTTAAGATTATACATAGAGATTTAAAAGCAAGCAACGTCTTACTTGATGATGACATGATTCCAAAAATATCAGACTTTGGTTTAACTAGAATTGTTAAAGGTGGAGAAGGTGATGAAGCTAACACAAAAAGGGTTGTTGGAACTTAG 1926 0.3655 MTIKKFFRRHYSASLERLDAPEVFIWYDKKIHWRTGPWNGRVFLGIPGISTEYLYGWRFVQDDDGTNYITYNLAGQTMFGILSLTPHGTLKIVAYVNKKEFLRLEVDQNECDFYGKCGPFGCCDNSSVPICSCFDGFEPKNSVKWSSRNWTNGCVRTAGMNLKCEMMKTGSNEFKQDGFLVNRNMKVPDFVERSDGDQDNCGAGCLANCSCLAYAYDPSIGCMYWSSELIDLQKFPSGGVDLFIRVPAEILSLGVDKNECDFYGKCGPFGNCDNSSIPICKCLEGFEPKNLEEWNLTNWTNGCVMKEELNLKCKILKNGSNEVLQEGFKVYHNMKVPYFAERSYGNKDKCGTDCLANCSCLAYAYDSSIGCVHWSGDLIGLQNFPHVGVDLFIRVPVELVKKEKGHKKGFLIISIAGGIGAFTLVICAYLLWRRRSARHKGRKCQNLTTRERNQMKLDELPLYDFEKLETATNSFDVGNMLGKGGFGPVYKGLLEDDQEIAVKRLSKASGQGIEEFMNEVVVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFDPLQKKKLDWRKRSNIVEGIARGIMYLHRDSRLKIIHRDLKASNVLLDDDMIPKISDFGLTRIVKGGEGDEANTKRVVGT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04414 641 ProSiteProfiles PAN/Apple domain profile. 164 247 IPR003609 -
Mepo1g04414 641 Pfam PAN-like domain 326 379 IPR003609 -
Mepo1g04414 641 Pfam PAN-like domain 175 232 IPR003609 -
Mepo1g04414 641 Pfam S-locus glycoprotein domain 33 141 IPR000858 GO:0048544
Mepo1g04414 641 Pfam S-locus glycoprotein domain 256 290 IPR000858 GO:0048544
Mepo1g04414 641 Pfam Protein tyrosine and serine/threonine kinase 477 626 IPR001245 GO:0004672|GO:0006468
Mepo1g04414 641 Gene3D Transferase(Phosphotransferase) domain 1 551 641 - -
Mepo1g04414 641 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 551 641 - -
Mepo1g04414 641 SMART serkin_6 475 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04414 641 ProSiteProfiles EGF-like domain profile. 256 292 IPR000742 -
Mepo1g04414 641 CDD PAN_AP_plant 171 247 - -
Mepo1g04414 641 SUPERFAMILY Protein kinase-like (PK-like) 455 640 IPR011009 -
Mepo1g04414 641 CDD PAN_AP_plant 325 396 - -
Mepo1g04414 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Mepo1g04414 641 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 439 550 - -
Mepo1g04414 641 ProSiteProfiles PAN/Apple domain profile. 313 396 IPR003609 -
Mepo1g04414 641 SMART ntp_6 323 395 IPR003609 -
Mepo1g04414 641 SMART ntp_6 174 246 IPR003609 -
Mepo1g04414 641 Gene3D Phosphorylase Kinase; domain 1 448 550 - -
Mepo1g04414 641 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 256 629 - -
Mepo1g04414 641 ProSiteProfiles Protein kinase domain profile. 475 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04414 Mepo-Chr1 51759323 51763982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04414 404 641 Receptor kinase-like Gene Family AT4G23190 54.393 2.92e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g04414 PK_Tyr_Ser-Thr 3.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04414 - - ccaj:109790907 582.022