Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04400 ATGTCAATGCCCTTGTTCACAAACTTGAACCACATTGAGACACTTCTCACTGCACCAAACACCAACAGCACAAACAATATAAGATGGCACAATGCCTTCATGAAAATCTATTGTTCTAGAGCTTTCATGTCACATTCTACCAAGAAACCAAAAATCACACCTACCCCATCTTTCACCGTGGTTGATTTTAATTCACCTCACTCTTTTACCATTGATCAAGAAACTCTCATAGATATTGTCAAAGAGAAAAACATTGACACACTTCAGAAACATGGTGGAGTTGAAGGTGTTGCTTCCTCACTCAAAACCAACATTGAGTTTGGTATCAAAAGCCATGATGATGATTTTCAAGACATTTCAATTCGACAACAAGTGTTTGGTTCCAACACTTACAAAAAACCACCTTCTAAAAGCTTCTTTCATTTTGTTGTTGAAGCTTTTAAGGATTTAACAATTCTTATTCTTTTGGTTTGTGCTACTCTTTCACTTGGCTTTGGAATCAAAGAGCATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCTTCAATAAGCAACTTTAAACAAAACAAACAATTTGATAAATTGTCTCAAGTGAGCAATGATATTCAAATTGATTTGGTTCGTAGTGGGCGCCGACAAAAGGTATCAATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCAGCCGATGGATTGTTCGTAGATGGACATTCGTTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGTGATCATGTAGAGATTAATCAAAACTTTCATCCTTTTTTGATTTCCGGAACAAAAGTTGTCGATGGATATGCAAAAATGCTCGTTACATCGGTTGGTATGAACACAACATGGGGACAAATGATGAGTTCCATAAGCAACGACATTGACGAAGAAACTCCTTTGCAAACAAGGTTGAATAAACTAACATCCTCAATCGGAAAGGTTGGTTTGGTTGTCGCATTTTTAGTCCTTGTTGTTCTGTTGATTCGATATTTCACGGGGAACACAAAGACTGATAACGGAGTTAGAGCGTTCAATGGTAGAAAGACTAGTTTTGATGATGTGATGAATGCAGTTATTGGAATTATTGCTGATGCTGTTACTATTGTCGTTGTTGCTATCCCGGAGGGTTTACCATTAGCTGTGACATTGACACTCGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGAAAACTTTCTGCATGTGAAACTATGGGATCAGCTACTACTATTTGCACTGACAAGACAGGTACACTCACTTTGAATCAAATGAAGGTGACAAAGTTTTGGCTTGGTTTAGAACCAATGGAAGTTGGTTCATATTCAAATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTTGCTCTCAATACAACTGGTGGTGTTCACAAATTGAAATCAGGTTCTGATTCGGAATTCGAGTTTTCAGGTAGTCCAACAGAAAAAGCAATACTATCTTGGGCTGTTTTGGAATTGAAAATGGATATGGAGCACTTGACCAAAAGTTGTTCTATTCTACAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAGAAGGAATGTTGACAACCAAACTATTTCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCAAAATACTATGATGGTTGTGGAATTTCGAAAGATCTTGACAATGAAACCATGTTGAAATTTGAAAGGATTATTCAAGGTATGGCGGCTAGTAGTCTTCGTTGCATCGCTTTAGCGTATACAAAAGTTGCAGACGAAGAGCTTGGAAATGAAGGAGACACGAACAAGATGTTGGTAAAAGACAATGGTTTAACGTTGTTAGGACTTGTCGGCATTAAGGATCCATGTCGCCCGGGGGTGAAGACTGCAGTGGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTGACAATGTTTTCACTGCAACAGCTATAGCATTTGAATGCGGAATTCTTCAACCTAATCAGGACACAAATGAAACAGTGGTTGAAGGCGAACAATTTCGCAACTTCACGCACGAAGAGAGGTTGGCGAAAGTTGAGAAAATCTCTGTGATGGCAAGGTCTTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTAAAACAAAAAGGTCATGTGGTAGCTGTAACCGGAGATGGAACAAACGATGCACCAGCATTGAAAGAAGCTGATATAGGACTTTCAATGGGAATTCAAGGTACTGAAGTAGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTATAAATTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAATTAACAGTGAATGTGGCAGCACTTGTTATAAATTTTGTAGCAGCGGTTTCAGCAGGCGAAGTTCCATTAACAGCAGTTCAATTATTATGGGTGAATTTGATTATGGATACATTAGGTGCATTGGCTCTTGCAACTGAAAAACCTACCAAGGATTTGATGGATAAAGAACCTGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTTTGTCACAAGCTTTGTACCAAATAGTAATTTTGTTGACTCTACAATTCAAAGGTGAGACTATTTTTGGTGTGAGTTCAAAGGTAAATGACACATTGATATTCAATACATTTGTTCTTTGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGTAAGTTGTTTTTGGGAATTGTTGGTGTGACATTGGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTAACACTGAGAGGTTGAATTGGAGAGAGTGGATTGTTTGTATTGGTTTTGCTGCTGTTTCTTGGCCAATTGGTTTTATTGTGAAGTTTATACCAGTCTCAGATAAACCATTACTTGATTTTTTGAATTTTAGGAAGAAATATTGA 3060 0.3712 MSMPLFTNLNHIETLLTAPNTNSTNNIRWHNAFMKIYCSRAFMSHSTKKPKITPTPSFTVVDFNSPHSFTIDQETLIDIVKEKNIDTLQKHGGVEGVASSLKTNIEFGIKSHDDDFQDISIRQQVFGSNTYKKPPSKSFFHFVVEAFKDLTILILLVCATLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISMSSISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFDIVVGDVVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEINQNFHPFLISGTKVVDGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLIRYFTGNTKTDNGVRAFNGRKTSFDDVMNAVIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPMEVGSYSNVDPFVLQLIKEGVALNTTGGVHKLKSGSDSEFEFSGSPTEKAILSWAVLELKMDMEHLTKSCSILQVETFNSKKKRSGVLLRRNVDNQTISHWKGAAEMVLRMCSKYYDGCGISKDLDNETMLKFERIIQGMAASSLRCIALAYTKVADEELGNEGDTNKMLVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVFTATAIAFECGILQPNQDTNETVVEGEQFRNFTHEERLAKVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVINWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKDLMDKEPVGRTKPLITNIMWRNLLSQALYQIVILLTLQFKGETIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGVTLVLQVVMVEFLKKFANTERLNWREWIVCIGFAAVSWPIGFIVKFIPVSDKPLLDFLNFRKKY 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04400 1019 SMART Cation_ATPase_N_a_2 90 167 IPR004014 -
Mepo1g04400 1019 ProSitePatterns E1-E2 ATPases phosphorylation site. 440 446 IPR018303 -
Mepo1g04400 1019 Gene3D - 118 314 - -
Mepo1g04400 1019 FunFam Calcium-transporting ATPase 764 1006 - -
Mepo1g04400 1019 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 445 645 IPR023299 GO:0000166
Mepo1g04400 1019 Pfam E1-E2 ATPase 215 416 - -
Mepo1g04400 1019 SUPERFAMILY HAD-like 436 852 IPR036412 -
Mepo1g04400 1019 FunFam Calcium-transporting ATPase 448 648 - -
Mepo1g04400 1019 SFLD p-type atpase 420 800 IPR044492 -
Mepo1g04400 1019 SFLD Haloacid Dehalogenase 420 800 - -
Mepo1g04400 1019 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 1004 IPR023298 -
Mepo1g04400 1019 Pfam haloacid dehalogenase-like hydrolase 435 761 - -
Mepo1g04400 1019 Gene3D - 448 648 IPR023299 GO:0000166
Mepo1g04400 1019 NCBIfam HAD-IC family P-type ATPase 381 458 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g04400 1019 NCBIfam HAD-IC family P-type ATPase 718 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g04400 1019 PRINTS H+-transporting ATPase (proton pump) signature 779 804 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g04400 1019 PRINTS H+-transporting ATPase (proton pump) signature 594 612 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g04400 1019 PRINTS H+-transporting ATPase (proton pump) signature 747 763 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g04400 1019 Pfam Cation transporter/ATPase, N-terminus 91 162 IPR004014 -
Mepo1g04400 1019 Pfam Cation transporting ATPase, C-terminus 832 1002 IPR006068 -
Mepo1g04400 1019 Gene3D - 145 1002 - -
Mepo1g04400 1019 NCBIfam calcium-translocating P-type ATPase, PMCA-type 73 1004 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mepo1g04400 1019 FunFam Calcium-transporting ATPase 186 314 - -
Mepo1g04400 1019 FunFam Calcium-transporting ATPase 642 792 - -
Mepo1g04400 1019 Gene3D - 435 792 IPR023214 -
Mepo1g04400 1019 SUPERFAMILY Calcium ATPase, transduction domain A 216 312 IPR008250 -
Mepo1g04400 1019 PRINTS P-type cation-transporting ATPase superfamily signature 641 652 - -
Mepo1g04400 1019 PRINTS P-type cation-transporting ATPase superfamily signature 438 452 - -
Mepo1g04400 1019 PRINTS P-type cation-transporting ATPase superfamily signature 261 275 - -
Mepo1g04400 1019 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Mepo1g04400 1019 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Mepo1g04400 1019 PRINTS P-type cation-transporting ATPase superfamily signature 663 673 - -
Mepo1g04400 1019 CDD P-type_ATPase_Ca_PMCA-like 122 880 - -
Mepo1g04400 1019 PANTHER CATION TRANSPORTING ATPASE 53 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04400 Mepo-Chr1 51628117 51631603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04400 12 1018 Primary Pumps ATPases AT3G22910 67.289 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04400 K01537 - gmx:100793918 1614.36