Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04393 ATGAAAGAGCCTGAGAGGCCATCAAATTTGCCTCTCCGACTATCAATTCAGGATTTCTACAATATTGGAGGAATCGGAGATGTGCCTGTGGGACATGTCGAGACTGGTTGCTTGCGCCCTGGAATGTCTGTGACTTTTGCCCCAACTGGGCTGCAAGCTGAAGTCAAATCTGTGGAGATGTACCCTGGAACTAGGCTGCAAGCTGAAGCGAACTCTTCGGAGATGCACCGTGAACCTCTAGATATGGCCTATCCTGGTGACATTGTGAGATTTAATGTCAATGTTTCTGCTACGGATCTCAAGCAAGGCTATGTTGCCTCAAACCCCGAGGATGACCCAGCCAAGGAGGTTGCTCACTTTACATCTCATGTTATCATCACAAATCACCCTAGCCAGATTGAAGAAGGCTATACACCTATTCTTCACTGCCACACCTCCCACATTCCTGTCAAATTTGCTAAGCTTATTTACAAGGTTGACAATCGTTCTCGTGAGCTAATTGAGAAATGCCCACCATTCTTGAAGAATGGTGACACTTGTCTTATTAAGATGATTCCGACCGAGCCTATGGTGGTAGAGCCTTTCTCTCTATATTCTCCACTCAGCCGTTTTGTTGTCCAAGACTTGCATCAAATTGTTGCTGTTGGTGTTGTCATCAATGTGACGAGGAAGATTACCAAGTCAACATTGAAGAAGAATTGA 702 0.453 MKEPERPSNLPLRLSIQDFYNIGGIGDVPVGHVETGCLRPGMSVTFAPTGLQAEVKSVEMYPGTRLQAEANSSEMHREPLDMAYPGDIVRFNVNVSATDLKQGYVASNPEDDPAKEVAHFTSHVIITNHPSQIEEGYTPILHCHTSHIPVKFAKLIYKVDNRSRELIEKCPPFLKNGDTCLIKMIPTEPMVVEPFSLYSPLSRFVVQDLHQIVAVGVVINVTRKITKSTLKKN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04393 233 FunFam Elongation factor 1-alpha 115 222 - -
Mepo1g04393 233 PANTHER ELONGATION FACTOR 1 ALPHA 3 61 - -
Mepo1g04393 233 SUPERFAMILY Translation proteins 4 113 IPR009000 -
Mepo1g04393 233 Gene3D Translation factors 116 222 - -
Mepo1g04393 233 CDD EF1_alpha_II 8 112 - -
Mepo1g04393 233 CDD EF1_alpha_III 115 218 - -
Mepo1g04393 233 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 118 221 IPR009001 -
Mepo1g04393 233 Gene3D Translation factors 7 115 - -
Mepo1g04393 233 Pfam Elongation factor Tu C-terminal domain 114 221 IPR004160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04393 Mepo-Chr1 51562909 51563610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04393 1 224 Eukaryotic Initiation Factors Gene Family AT5G60390 60.000 7.96e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04393 K03231 - gmx:100499630 268.47