Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04392 ATGGATAGGGAAAAGGTTCGATTTAACATTGTAGTTATTGGTCATGCCACCTCTGGGAAGTCAACCACTACTGCTCATTTGCTCTACAAGCTTGGAGGCATTGAAAAGGATGTCATTGAGAGACTTGAGAAAGTAGCTGTTGAGGTTAACATGCCTTCATTCAAGTATGCTTGGGTGCTTGAAAAACTCAAGGGTGAGCGTGAAAGAGGTGCCACAAGTACAACTGCACTGTCATTGATGCCCCCGAACACAGAATACATTAAGAACATGATCACTGGAGCGTCCCTAGCTGACTGTGCTGTTCTCATCATTTATTCCACTACTACTGGTGGTTTTAAAGCCGGTATGATTGGTCAGACCTTTGAACATGCTCTTGCCTTCAATCTTGGTGCGAATCAAATTATCATCTGCTGCAACAAGATGGATGCCACTACACCCAAATACTCCATGGATAGGTATGAAGAAATATCGGAGCAAGTTTTATCCTATTTGATCAAGGTTGGCTATAAGCCATATGAAATTCCATTTATTCCCATCTCTAGTTTTGATGGAGATACTTGA 561 0.4189 MDREKVRFNIVVIGHATSGKSTTTAHLLYKLGGIEKDVIERLEKVAVEVNMPSFKYAWVLEKLKGERERGATSTTALSLMPPNTEYIKNMITGASLADCAVLIIYSTTTGGFKAGMIGQTFEHALAFNLGANQIIICCNKMDATTPKYSMDRYEEISEQVLSYLIKVGYKPYEIPFIPISSFDGDT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04392 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 185 IPR027417 -
Mepo1g04392 186 Pfam Elongation factor Tu GTP binding domain 8 185 IPR000795 GO:0003924|GO:0005525
Mepo1g04392 186 Gene3D - 1 186 IPR027417 -
Mepo1g04392 186 PANTHER TRANSLATION FACTOR 6 185 - -
Mepo1g04392 186 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo1g04392 186 PRINTS GTP-binding elongation factor signature 92 103 IPR000795 GO:0003924|GO:0005525
Mepo1g04392 186 PRINTS GTP-binding elongation factor signature 134 143 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04392 Mepo-Chr1 51562198 51562846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04392 1 185 Eukaryotic Initiation Factors Gene Family AT1G07930 63.500 7.67e-78 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04392 K03231 - atr:18436151 233.802