Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04364 ATGGAGACAAGTAATGTTTCTAGTTCCATGGTGGCTGACATTGATGATAATCCCACCATTGCCGGCGGTGTTCGGGATGTTTATGGTGAGGATAGAGCCACTGAGGATCAGTTTGTTACTCCTTGGAGTGTTACTGTTGCTAGTGGATATACTTTGTTGAGAGATCCACATTTCAATAAAGGACTAGCCTTCACCGAGAAAGAGAGGGATGCACACTACTTGCGTGGTCTTCTTCCCCCAACAGTTATTTCTCAAGAAATTCAGGTAAAGAAAATGATCCAAAACATAAGACAGTATCAAGTTCCACTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGAGAAACGAAGGGCTGTTTTACAAGCTTCTTATTGATCATGTTGAGGAGTTACTCCCAGTTGTTTATACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGGTCCATCTTCATGCATCCTCAGGGACTTTATATAAGCTTGAAAGAGAAAGGAAGGATTCTTGAAGTACTTAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAGCGGATCTTGGGACTTGGGGATCTTGGCTGTCAAGGGATGGGAATTCCAGTAGGAAAACTTTCTCTATATACTGCACTTGGTGGAGTTCGTCCTTCTTCGTGCTTGCCTATTACCATTGATGTCGGTACAAATAATGAGAAGTTGTTGAATGAAGAATTATACATAGGGCTTAAACATAGACGAGCAACTGGGAAGGAATATGCTGAACTTCTCAAAGAATTCATGACAGCATGCAAGCAAAATTACGGAGAAAAAGTCCTCATCCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACGCATCTTGTTTTTAATGATGATATTCAGGGAACTGCAGCAGTGGTCCTTGCAGGAATAGTTTCAGCTCTAAATTTGGTTGGGGGAAGCTTGGGCGACCATCGGTTCTTGTTCCTTGGTGCTGGAGAGGCAAGCACTGGAATAGCGGAACTCATTGCACTCGAAATTTCAAAACGGACAAATTCCCCACTGGATGAAGTGAGCAAGAACATATGGTTGGTGGACTCAAAGGGTTTGATTGTGAGTTCTCGCAAAGAATCACTTCAACATTTTAAGAAGCCATGGGCTCATGAACACGAACCTGTTGAGAAACTTGTAGATGCTGTTAAACAAATTAAGCCAACAGTGTTGATTGGAACATCAGGGCAAGGGAGAACTTTTACTCAGGATGTGGTCAAAGCGATGGCCTCTTTAAATGAGAAACCTATTATTCTTGCTCTTTCCAACCCAACATCTCAGTCAGAATGTACTGCAGAAGAAGCTTATACGTGGACCCAGGGACGTGTCATTTTTGCTAGCGGTAGCCCATTTTCCCCAGTAGAGTATGATGGAAAAGTGTTTGTACCTGGCCAGGCCAATAACGCATACATTTTTCCTGGATTTGGTCTCGGTTTAATAATGTCTGGTACAATCCGAATGCACGATGGCTTGCTTCTGGCAGCTTCTGAGGCTTTGGCTTCTCAGGTTACCCAAGAGCATTATGACAGGGGACTCATATACCCGCCATTCACTAACATCAGAAAAATTTCGGCACACATTGCTGCTAAAGTTGCTACGAAGGCTTATGAGCTTGGCTTGGCTACTCGCCTTCCTCAACCAAAAGATTTGGTGAAATTTGCTGAGAGCTGTATGTATAGCCCAAATTACAGAAGCTACCGGTGA 1767 0.4301 METSNVSSSMVADIDDNPTIAGGVRDVYGEDRATEDQFVTPWSVTVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTVISQEIQVKKMIQNIRQYQVPLQKYMAMMDLQERNEGLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMHPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNEELYIGLKHRRATGKEYAELLKEFMTACKQNYGEKVLIQFEDFANHNAFDLLERYRSTHLVFNDDIQGTAAVVLAGIVSALNLVGGSLGDHRFLFLGAGEASTGIAELIALEISKRTNSPLDEVSKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVEKLVDAVKQIKPTVLIGTSGQGRTFTQDVVKAMASLNEKPIILALSNPTSQSECTAEEAYTWTQGRVIFASGSPFSPVEYDGKVFVPGQANNAYIFPGFGLGLIMSGTIRMHDGLLLAASEALASQVTQEHYDRGLIYPPFTNIRKISAHIAAKVATKAYELGLATRLPQPKDLVKFAESCMYSPNYRSYR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04364 588 SMART malic_2 113 294 IPR012301 GO:0004471
Mepo1g04364 588 Gene3D - 47 301 IPR037062 GO:0004471
Mepo1g04364 588 PANTHER MALIC ENZYME-RELATED 19 587 - -
Mepo1g04364 588 ProSitePatterns Malic enzymes signature. 300 316 IPR015884 GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 179 208 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 331 347 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 119 143 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 215 237 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 434 450 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 300 316 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 PRINTS Malic enzyme signature 275 293 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 FunFam Malic enzyme 47 301 - -
Mepo1g04364 588 PIRSF ME 23 588 IPR001891 GO:0004470|GO:0004471
Mepo1g04364 588 Gene3D - 302 588 - -
Mepo1g04364 588 SMART Malic_M_2 304 557 IPR012302 GO:0051287
Mepo1g04364 588 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 25 303 IPR046346 -
Mepo1g04364 588 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 304 587 IPR036291 -
Mepo1g04364 588 Pfam Malic enzyme, N-terminal domain 113 294 IPR012301 GO:0004471
Mepo1g04364 588 Pfam Malic enzyme, NAD binding domain 304 557 IPR012302 GO:0051287
Mepo1g04364 588 CDD NAD_bind_1_malic_enz 304 582 - -
Mepo1g04364 588 FunFam Malic enzyme 302 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04364 Mepo-Chr1 51287650 51292804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04364 K00029 - gmx:100791514 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04364 1 51287650 51292804 Mepo1g04364 1 51287650 51292804 ECH
Mepo1g04364 1 51287650 51292804 Mepo6g04162 6 53755492 53760629 ECH
Mepo2g04857 2 56810894 56827494 Mepo1g04364 1 51287650 51292804 ECH
Mepo3g07648 3 89771390 89776754 Mepo1g04364 1 51287650 51292804 ECH
Mepo1g04364 1 51287650 51292804 Mepo3g07648 3 89771390 89776754 ECH
Mepo1g04364 1 51287650 51292804 Mepo4g04197 4 51856304 51857855 ECH
Mepo1g04364 1 51287650 51292804 Mepo1g03812 1 44365709 44367968 ECH
Mepo1g04364 1 51287650 51292804 Mepo3g02207 3 31781928 31783532 ECH
Mepo6g04162 6 53755492 53760629 Mepo1g04364 1 51287650 51292804 PCT