Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04360 ATGATTCTCCTAGGAAAACCCCATTTGAAGTTGCTTCAATTTGTTCTATTTTTGTTTTACCTTCATTTCAACAGTAGTAGTTCTTATCAGATGGCTCCAATGAACTGTACGGACACAAGACGAGTTTGCACATCTTTCTTGGCCTATAAGCCTCAACAGAATCAATCTTTGGGAGTGATTCAAAGCATGTTTGATGTGTTGCCAAGTGACATCACAGTTGAAGGAAATGGTTGGGATTATATATTCATAAGGAAGAATTGTTCTTGTGCATCTGGGATCAAGAAATATGTGTCTAATACAACTTTTACTGTTAAAACCAATGAAGGGTTTGTGGATGATTTGGTTATGGATGCTTATGATGGGCTTATTTTGCTTCCAAATACTTCAAGGAAGGCAAGGAATGGTGCTGTTATATCATTGAGGTTGTTTTGTGGCTGTTCTAGTGGATTGTGGAATTATTTGTTGAGTTATGTGTTGAGAGATGGGGATAGTGTTGAATCTTTGGCTAGTAGATTTGGGGTTAGTATGGATAGTATTGAGGGTGTGAATGGCCTTGATGGTCCTGATAATGTTACTGTCGGTTCGCTTTATTATATTCCTCTTGATTCTGTTCCTGGTGATCCTTATCCTCTGAACAATGCTTCTCCACCAGCTTCTGTTCCTACCCCTTCTGTTGATAATATTTCAGGTGATCAGGACAATCATAAGTATCATGTACCATATGGATGGATCATTGGAGGTTTAGGAGTTGGTCTTATTCTGATAATATTAGGCATAATTCTGTGTGTTTGCCTGAGATCATCAAATTGCTTTTCTGATTCTCGAAGTCATGAAAAAGATGCTGAGGGAAAGGTCTCCCATAAATTCCAAATTCTTCGGAATCCAAGTTTTTTTTGTGGTTCTGGACGGTACATATGCGGCAAACATGTTGACCAAAAGCAAACAGACGGCGACTCCAGCACTCACACAATTACTGTTCCCAAAGCTCCAACGCTAGGGCCAGACGTATTTGACATGGATAAGCCGGTAGTGTTTGCATATGAAGAGATTTTTTCCTCAACTGAAGGCTTCTCTGATTCAAATCTACTTGGACATGGAACATATGGATCTGTCTACTATTGCCTCCTTCGTGACCAGGAAGTCGCTATTAAAAGAATGACAGCTACAAAAACAAAAGAGTTTACATCAGAGATTAAAGTTCTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCACGATGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTTCACTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGTCATTCACCACTTTCATGGATCATGAGGGTTCAGATTGCACTTGATGCTGCTAGGGGACTTGAATATATACATGAGCACACAAAAGCTCATTATGTCCACCGTGATATCAAGACAAGCAACATTTTACTTGATGCTTCTTTTAAAGCAAAGATTTCAGATTTTGGGTTGGCGAAACTTGTCGGGATAACAAATGAGGGAGGAGACGTTTCAACTACAAAAGTTGTTGGTACATATGGATATCTTGCCCCGGAATACTTGAGTGACGGCCTTGCGACAACCAAAAGTGACGTCTACGCATTTGGTGTTGTCCTTTTTGAGACTATAACCGGAAAGGAGGCCATTATTCGAACAGAAGGCATGATGACAAAAAATCCTGAAAGACGATCACTCGCATCAATAATGTTGGCAGTTCTTAGGAACTCACCTGATTCCTTGAGCATGTCAAGCATGAAAGATTACATTGATCCAAATATGATGAATCTGTATCCCCATGATTGTGTATTTAAGATGGCTATGCTGGCGAAGCAATGTGTGGACGACGATCCAATCTTACGACCTGATATGAAAACAGTAGTGATTTCCATCTCACAGATTCTTTTGTCTTCTATTGAGTGGGAAGCAACACTAGCTGGGAATAGCCAAGTATTTAGTGGACTTGTTCAGGGAAGATAG 2007 0.3996 MILLGKPHLKLLQFVLFLFYLHFNSSSSYQMAPMNCTDTRRVCTSFLAYKPQQNQSLGVIQSMFDVLPSDITVEGNGWDYIFIRKNCSCASGIKKYVSNTTFTVKTNEGFVDDLVMDAYDGLILLPNTSRKARNGAVISLRLFCGCSSGLWNYLLSYVLRDGDSVESLASRFGVSMDSIEGVNGLDGPDNVTVGSLYYIPLDSVPGDPYPLNNASPPASVPTPSVDNISGDQDNHKYHVPYGWIIGGLGVGLILIILGIILCVCLRSSNCFSDSRSHEKDAEGKVSHKFQILRNPSFFCGSGRYICGKHVDQKQTDGDSSTHTITVPKAPTLGPDVFDMDKPVVFAYEEIFSSTEGFSDSNLLGHGTYGSVYYCLLRDQEVAIKRMTATKTKEFTSEIKVLCKVHHANLVELIGYAASHDELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKAHYVHRDIKTSNILLDASFKAKISDFGLAKLVGITNEGGDVSTTKVVGTYGYLAPEYLSDGLATTKSDVYAFGVVLFETITGKEAIIRTEGMMTKNPERRSLASIMLAVLRNSPDSLSMSSMKDYIDPNMMNLYPHDCVFKMAMLAKQCVDDDPILRPDMKTVVISISQILLSSIEWEATLAGNSQVFSGLVQGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04360 668 ProSiteProfiles Protein kinase domain profile. 357 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04360 668 FunFam Kinase family protein 332 428 - -
Mepo1g04360 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mepo1g04360 668 Pfam LysM domain 157 194 IPR018392 -
Mepo1g04360 668 Gene3D Transferase(Phosphotransferase) domain 1 430 654 - -
Mepo1g04360 668 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 662 IPR044812 GO:0019199|GO:0045087
Mepo1g04360 668 SMART serkin_6 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04360 668 ProSiteProfiles LysM domain profile. 155 199 IPR018392 -
Mepo1g04360 668 Gene3D Phosphorylase Kinase; domain 1 334 428 - -
Mepo1g04360 668 SMART LysM_2 156 200 IPR018392 -
Mepo1g04360 668 Gene3D LysM domain 152 205 IPR036779 -
Mepo1g04360 668 FunFam PTI1-like tyrosine-protein kinase 3 429 654 - -
Mepo1g04360 668 SUPERFAMILY LysM domain 156 200 IPR036779 -
Mepo1g04360 668 CDD LysM 156 199 IPR018392 -
Mepo1g04360 668 Pfam Protein tyrosine and serine/threonine kinase 361 637 IPR001245 GO:0004672|GO:0006468
Mepo1g04360 668 SUPERFAMILY Protein kinase-like (PK-like) 336 637 IPR011009 -
Mepo1g04360 668 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04360 Mepo-Chr1 51244866 51250612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04360 33 668 Receptor kinase-like Gene Family AT1G51940 68.634 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo1g04360 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04360 - - gmx:100796989 1112.44