Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04348 ATGGATAAGAAAAAGGCTTATATTAACATTGTGGTTATTGGTCATGCCAACTCCGGGAAGTCAACCGCTACTGCTCATTTGCTCTACAAGCTCGGAGGCATTGAAAAGGATGTCATTGAGAGACTTGAGAGAGTAGCTGTTGAGGTTAACATGCCTTCATTCAAGTATGCTTGGGTGCTTGACAAACTCAAGGGTGAGCGTGAAAGAGGTGCCACAATTGACATTTCTCTGTCCAAGTTTGAGACAAATAAGTACAACTGCACTGTCATTGATGCCCCCGGACACAGGGAATACATTAAGAACATGATCACTGGAGCGTCCCTAGCTGACTGTGCTGTTCTCATTATTGATTCCACTACTACTGGTGGTTTTAAAGCCGGTATGATTGGTCAGGCCTTTGAACATGCTCTTCTTGCCTTCAATCTTGGTGTGAATCAAATGATCTACTGCTGCAACAAGCGTCTTCCCCATGAAGGTGCAGCTGCTGCTGCCATTACTGCTGCTATTCAGCCCACTGTGACGAACTCGAAACCTATTTTGAATGCCACAATTGAAGAGACTTTAGTTGACAACACTTTAGTCTCCCATGATGCTTCCTAA 600 0.4433 MDKKKAYINIVVIGHANSGKSTATAHLLYKLGGIEKDVIERLERVAVEVNMPSFKYAWVLDKLKGERERGATIDISLSKFETNKYNCTVIDAPGHREYIKNMITGASLADCAVLIIDSTTTGGFKAGMIGQAFEHALLAFNLGVNQMIYCCNKRLPHEGAAAAAITAAIQPTVTNSKPILNATIEETLVDNTLVSHDAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04348 199 PANTHER TRANSLATION FACTOR 4 153 - -
Mepo1g04348 199 Gene3D - 1 175 IPR027417 -
Mepo1g04348 199 Pfam Elongation factor Tu GTP binding domain 7 153 IPR000795 GO:0003924|GO:0005525
Mepo1g04348 199 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mepo1g04348 199 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo1g04348 199 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mepo1g04348 199 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mepo1g04348 199 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 199 IPR000795 GO:0003924|GO:0005525
Mepo1g04348 199 FunFam Elongation factor 1-alpha 1 131 - -
Mepo1g04348 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 153 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04348 Mepo-Chr1 50963283 50965503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04348 1 153 Eukaryotic Initiation Factors Gene Family AT1G07930 74.839 9.20e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04348 K03231 - dcr:108222823 228.794