Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04347 ATGGTGACACCTAAGCCAATGGGTGGTGGCGACACCAAACACATAACTTTAATTGGTTTTATTGAAAATGAATACAAAGATGATGTTTATGACCGCATCTGGTTGCCCTATGAATCATCCCGTGATTGGGAACGATTAAACACCTCACTTAACAATGACGATCTACTTCAGGATCATTATCAACCACCAGCAATTGTGATGAGCACTGCTGTTACACCACTAAATGCCAGTGCCCCTTTACAATTTCAATGGGATGCAGATAATGTAAATGACCATTACTACTTATATTTTCTCTTTAATGAGGTTGAGAAGCTGGCAGAAAATAAAACTAGATCATTCATTATCACAGTGAATGGAGACCGTTTGTATGGACCTGAGATGCCTAAATACCAAAAAGTTGTGACCGTATATTGTAAAAGACCTTTGACTAGAGACAAAAGCTATCAAATTTCCCTGTCTAAGACAGAGAATTCAACCCTTCCACCCATCATCAATGCCTTTGAGGTTTATAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAGGATGATGGGAAGATATCATCTTTCATCTCAAAGCTCACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTTTGATGCAACTGCAATCATTAAAAGTCTTCCTTGCATATTTTCATTCAATTTTTTTTATCACCATAGCTACGTCGTCAAATTCTAAGAAAAGGGGTTCAATGAAATCAAAGCATCAAATATTCACTTACACCGAAATTCTCAATATTACTGATAACTTCAAAACAATTATTGGAGAAGGAGGATTTGGAAAAGTTTACATTGGCATTTTACAAGATCACACTCAAGTTGCTGTTAAGATTCTTTCAACATCATCAAAGCAAGGTTATAAGGAATTTCAATCCGAGGCGCAACTTCTAATGATTGTTCATCATAGAAATTTAGTTTCTCTCATTGGATATTGTGATGAAGATGAAAGCATAGCATTGATTTATGAATACATGACAAATGGAAGTCTCCATCAACACTTATTTGATGATAAGACAAATATTTTAAAATGGAATGAAAGACTCAAAATTGCAGTTGATGCAGCACATGGATTGGAGTATCTTCATAATGGGTGTAATCCACCTATTTTGCATAGAGATATGAAGCCTGCTAACATATTATTAGATGAGAATATGCATGCCAAGATAGCTGATTTTGGCTTAAGTAGAGCTTTTGTTAACGATGTTGATTCTCATATATCCACTCGTCCAGCTGGTACACGAGGTTATATTGATCCTGAATATCAAAGAACAAGAAAGACAAACAAAAAAAATGATATCTACAGCTTCGGAATTATTCTACTTGAGTTGATCACTGGAAAAAAAGCAATCGCGAGAGTATCTGATGAATACCTTCACATACTGCAATGGGTTATTCCCATAGTTGAAGGAGGAAATATTCAAAATGTTGTTGATCCAAGGTTGCAGGGTGACTTTAGCATCAATTCACTATGGAAAACTGTAGAGATTGCCAAGTCATGCACTTCACCAAATTCAGTTGAAAGGCCAGACATTAGTCAAATATTAGTAGAGCTAAAGGAATGTCAATCTTTGGACATAGTTCAGAGAGATAATGGAAGCATGAGAGCAAGAGATGAATTGGTTTCTGTAGCTACTGTATCGGAAACCACTATTTTAGCTAGATGA 1713 0.3573 MVTPKPMGGGDTKHITLIGFIENEYKDDVYDRIWLPYESSRDWERLNTSLNNDDLLQDHYQPPAIVMSTAVTPLNASAPLQFQWDADNVNDHYYLYFLFNEVEKLAENKTRSFIITVNGDRLYGPEMPKYQKVVTVYCKRPLTRDKSYQISLSKTENSTLPPIINAFEVYKVKDFSQSETQQDDGKISSFISKLTMLQYLDLSNNSLNGPLPDFLMQLQSLKVFLAYFHSIFFITIATSSNSKKRGSMKSKHQIFTYTEILNITDNFKTIIGEGGFGKVYIGILQDHTQVAVKILSTSSKQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDESIALIYEYMTNGSLHQHLFDDKTNILKWNERLKIAVDAAHGLEYLHNGCNPPILHRDMKPANILLDENMHAKIADFGLSRAFVNDVDSHISTRPAGTRGYIDPEYQRTRKTNKKNDIYSFGIILLELITGKKAIARVSDEYLHILQWVIPIVEGGNIQNVVDPRLQGDFSINSLWKTVEIAKSCTSPNSVERPDISQILVELKECQSLDIVQRDNGSMRARDELVSVATVSETTILAR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04347 570 Gene3D Phosphorylase Kinase; domain 1 273 341 - -
Mepo1g04347 570 PANTHER OS07G0107800 PROTEIN-RELATED 185 538 - -
Mepo1g04347 570 SMART serkin_6 265 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04347 570 CDD STKc_IRAK 271 536 - -
Mepo1g04347 570 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 341 546 - -
Mepo1g04347 570 Gene3D Ribonuclease Inhibitor 127 272 IPR032675 -
Mepo1g04347 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Mepo1g04347 570 SUPERFAMILY Protein kinase-like (PK-like) 246 534 IPR011009 -
Mepo1g04347 570 Pfam Protein kinase domain 268 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04347 570 ProSiteProfiles Protein kinase domain profile. 265 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04347 570 Gene3D Transferase(Phosphotransferase) domain 1 342 555 - -
Mepo1g04347 570 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Mepo1g04347 570 SUPERFAMILY L domain-like 149 236 - -
Mepo1g04347 570 Pfam Malectin-like domain 24 172 IPR024788 -
Mepo1g04347 570 FunFam Leucine-rich repeat receptor-like protein kinase 242 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04347 Mepo-Chr1 50953710 50959794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04347 24 537 Receptor kinase-like Gene Family AT2G14510 37.242 3.76e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g04347 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04347 - - mtr:25500367 618.231