Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04345 ATGAGCACTGCTATTACACCAATAAATGCCAGTGCCCCTTTACAATTAGTATGGGATGCAGATAATGTAAATGACCAATACTATGCATATTTTCACTTTAATGAGGTTGAGAAGCTGACAGAAAATGAAACTAGATCATTCAATATCACAGTGAATGGAGACCTTTTCTCTGACCCTGCTATAGTGATACCTGGGTACCAAGTGACAGAAACCATCCTTAGTACAAAACCTTTGCCTGGAGCCACAAGGTATATATTTTCCCTTTTTAAGACAGAGAATTCAACCCTCCCACCCATCATCAATGCCTTTGAAGTTTATAAACTAAAAGACTTCTCACAATCAGAATCTCAACAGGATGATGTTGATACTATCACAAACATCAAGAATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGCTCCTGTGAATTACATGTGGGAAGGCCTCAACTGCAGTATTGATGGAAATAACATCCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGACTGACAGGGCAGATAGCATCTTCCATATCAAAGCTCACTATGTTGCAATACTTGGATTTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTCTGATGCAACTGCGATCACTAAAAGTCTTAAATGTAGGGAAAAACAAACTTACAGGGCTAGTTCCAAGTGGACTCCTTGAGAGATCAAAATCAGGTTCATTATCACTGAGTGTGGTTGATAATCCTGGTCTTTGTAAGACTGAATCATGCAAAAAGAAGAAGAAATTGTTTGTACCACTTATTGCATCATTTTCAGCATTTATTGTAATCCTCTTGATTTCTCTTGGATTTCGGATGTTCAGAAGACAAACAGTTATGTATTCAAGTTCTAAGGAGAGAGGTTCAATGAAATCAAAACATCAAAGATTCAGTTATACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACCAGACCAAACTCAAGTCGCTGTCAAGAGGCTTTCACCATCATCAATTCAAGGCTATAAGGAATTTCAATCAGAGGCACAACTTTTAACAATTGTTCATCATAGAAATTTGGTCTCCCTCATTGGATATTGTAATGAAGGTGAAATCAAAGCATTGATTTATGAATACATGGCTAATGGAAATCTGCAACAACAATTATCAGTGGAAAATTCGAAGATCTTAAACTGGAATGAGAGACTTAACATTGCAGTTGATGCAGCATATGGATTGGAGTATCTGCATAATGGATGCAAACCACCTATTATGCACAGAGATTTGAAACCATCCAACATATTGCTAGATGATGACATGCATGCCAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTTGGTAACGATGTTGATTCTCATATATCCACTCGCCCTGCTGGTACATTTGGTTACATTGACCCAGAATTTCAGAGAACAGGAAACACAAATAAGAAAAATGATATCTACAGCTTTGGGATTATTCTATTTGAGTTGATCACTGGCCAAAAAGCACTAATAAAAGCATTTGAAAAAACCATTCACATACTTCAATGGGTTATTCCCATAGTTGAAGGAGGAGATATTCAAAATGTTGTTGATTCAAAGTTGCAGGGTGACTTTAGCATCAATTCAGCATGGAAAGCTGTAGAGATTGCCATGTCATGCACTTCACCAAATGCAATTGAAAGGCCAGACATGAGCCAAATATTGGTAGATCTAAAGGAATGTCTATCTTTGGACATGGTTCAGAGAAACTATGGAAGCACAAGAGCTATAGATGATATGATTTCTTTAGCTACTGTATCTGAAACCACTCTTTCAGCTCGATAA 1872 0.3707 MSTAITPINASAPLQLVWDADNVNDQYYAYFHFNEVEKLTENETRSFNITVNGDLFSDPAIVIPGYQVTETILSTKPLPGATRYIFSLFKTENSTLPPIINAFEVYKLKDFSQSESQQDDVDTITNIKNAYGVARNWQGDPCAPVNYMWEGLNCSIDGNNIPRITSLNLSSSGLTGQIASSISKLTMLQYLDLSNNSLNGPLPDFLMQLRSLKVLNVGKNKLTGLVPSGLLERSKSGSLSLSVVDNPGLCKTESCKKKKKLFVPLIASFSAFIVILLISLGFRMFRRQTVMYSSSKERGSMKSKHQRFSYTEILNITDNFKTIIGEGGFGKVYFGTLPDQTQVAVKRLSPSSIQGYKEFQSEAQLLTIVHHRNLVSLIGYCNEGEIKALIYEYMANGNLQQQLSVENSKILNWNERLNIAVDAAYGLEYLHNGCKPPIMHRDLKPSNILLDDDMHAKIADFGLSRAFGNDVDSHISTRPAGTFGYIDPEFQRTGNTNKKNDIYSFGIILFELITGQKALIKAFEKTIHILQWVIPIVEGGDIQNVVDSKLQGDFSINSAWKAVEIAMSCTSPNAIERPDMSQILVDLKECLSLDMVQRNYGSTRAIDDMISLATVSETTLSAR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04345 623 Gene3D Transferase(Phosphotransferase) domain 1 394 607 - -
Mepo1g04345 623 FunFam Leucine-rich repeat receptor-like kinase 119 252 - -
Mepo1g04345 623 Gene3D Phosphorylase Kinase; domain 1 291 393 - -
Mepo1g04345 623 SMART serkin_6 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04345 623 SUPERFAMILY L domain-like 124 235 - -
Mepo1g04345 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Mepo1g04345 623 FunFam Leucine-rich repeat receptor-like protein kinase 296 393 - -
Mepo1g04345 623 PANTHER OS07G0107800 PROTEIN-RELATED 1 591 - -
Mepo1g04345 623 Pfam Protein tyrosine and serine/threonine kinase 320 586 IPR001245 GO:0004672|GO:0006468
Mepo1g04345 623 CDD STKc_IRAK 324 589 - -
Mepo1g04345 623 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Mepo1g04345 623 ProSiteProfiles Protein kinase domain profile. 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04345 623 Pfam Malectin-like domain 1 107 IPR024788 -
Mepo1g04345 623 Pfam Leucine rich repeat 162 222 IPR001611 GO:0005515
Mepo1g04345 623 SUPERFAMILY Protein kinase-like (PK-like) 300 587 IPR011009 -
Mepo1g04345 623 Gene3D Ribonuclease Inhibitor 121 242 IPR032675 -
Mepo1g04345 623 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 394 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04345 Mepo-Chr1 50938882 50943066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04345 1 600 Receptor kinase-like Gene Family AT1G05700 45.853 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g04345 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04345 - - mtr:25500366 885.56