Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04344 ATGAGCACTGCTGTTACACCAGTAAATGCCAGTGTCCCTTTACAATTTCACTGGGATGCAGATAATGTAAGTGACCAATTCCAAGTCTATTTGCACTTTAATGAGGTTGAGAATCTGGCTGGAAATGAAACTAGGGTATTCAATATTACATCAAATATCAGAGTTGATGAATACAAGATACATAATACATACCGAGAAGTAAATACCATATTGTCTCCAATACCTTTTACTGGAGCCACAAGGTATCATATTTCTCTTTCCAAGATAGAGAATTCAACCCTTCCACCCATCCTAAATGCTTTTGAGATTTATATTGCAAAAGATATCTCACAATCAGAAACTGAACAAGATGACGTTGATGCTATCACAAACATCAAAGATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGAATTATATGTGGGAAGGCCTAAACTGTAGTATTGATGGCTATAGCATTTCAAGAATCACATCTTTGGATTTGAATTCAAGTGGATTAACAGGGCATATAGCATCTTCCATCTCAAAGCTCATTATGTTAGAGTACTTCATGAAAGATAAAAAAAAAGTGTCATATTTGTCATGTGTTCGCAGAAATATGGGGAAGAACAAACTCTCAGGGTTAGTTCCAAGTGAATTCCTTGAGAAATTAAAAAAAGGTTCACTATCATTGAGTGTAGATGATAATCCTGATCTTTGTATGACGGAATCCTGTGGAAAGAAAATTTTTTTTGTACCACTTATGATTGGATTAATTGATTTTTCTTGGATATTGGTGTTCAGAACACTAAAAGCTGTAGTTACTTCTTCAAATTCTAAGGAAAGAGGTTCAATGAAATCAAAACACCAAAACTTCAGTTATTCTGAAATTCTCAACATTACTGATAACTTCAAAACTATTATTGGAGAAGGTGGATTTGGAAAAGTTTACATTGGCTTTTTACAGGATCACACTCAAGTGGCTGTAAAAATGCTTTCAAAATCATCAAAGCAAGGTTATAAGGAATTTCAATCTGAGGCGGAACTTCTAATTATTGTTCATCATAGAAATTCGGTCTCTCTCATTGGGTATTGTGATGAAGATGAACGCAAAGCATTGATTTATGAATACATGGCCAAAGGAAATCTCCAGCAACACTTATTAGGTAATTATGTATTAATTGTCTTTAGCTGGCTTAATTGCAACTTTGATCTTCTTATTTTTCTCAGATTGGAATATCTGCATAATGGATGTAAACCAGCTATTATGCACAGAGATTTGAAGCCTACCAACATGTTACTAGACGAGAATATGCATGCCAAGATAGCTGATTTTGGCCTAAGTAGAGCTTTTGGTAACGATATTGATTCTCATATATCCACCCAACCTGCTGGTACACTAGGTTATGTTGATCCTGCCTATCAGAGAACAGGAAACACAAATAAAACAAATGATATCTACAGTTTTGGAATAAATCTATTTGTGTGGATCACTGGTCGTCAAGCAATTGTAAGAGCAGCTGGAGAAATCATCCACATACTTCAATGGGTTATACCCATAATTGAAGGAGGAGATATTCAGAAACATTTTGATCCAAAGTTGGAGGGTAAATTTTGCATCAATTCAGCACGAAAAGCTGTAGAGATTGCCATGTCATGCATTTCACCAAATGCAGCAGAAAGGCCAGGCATGAGCCAAATATTGGCAGAACTAAGGGAGTGTCTATCTTTGGAGATGGTTCAGAGAAATAATGGAAACACAAGACCTAGAGATAAATTGGTTTCTGTAGCTACTGTATCAGAAACCATTCCTTTAGCTACATAA 1821 0.3591 MSTAVTPVNASVPLQFHWDADNVSDQFQVYLHFNEVENLAGNETRVFNITSNIRVDEYKIHNTYREVNTILSPIPFTGATRYHISLSKIENSTLPPILNAFEIYIAKDISQSETEQDDVDAITNIKDAYGVARNWQGDPCGPVNYMWEGLNCSIDGYSISRITSLDLNSSGLTGHIASSISKLIMLEYFMKDKKKVSYLSCVRRNMGKNKLSGLVPSEFLEKLKKGSLSLSVDDNPDLCMTESCGKKIFFVPLMIGLIDFSWILVFRTLKAVVTSSNSKERGSMKSKHQNFSYSEILNITDNFKTIIGEGGFGKVYIGFLQDHTQVAVKMLSKSSKQGYKEFQSEAELLIIVHHRNSVSLIGYCDEDERKALIYEYMAKGNLQQHLLGNYVLIVFSWLNCNFDLLIFLRLEYLHNGCKPAIMHRDLKPTNMLLDENMHAKIADFGLSRAFGNDIDSHISTQPAGTLGYVDPAYQRTGNTNKTNDIYSFGINLFVWITGRQAIVRAAGEIIHILQWVIPIIEGGDIQKHFDPKLEGKFCINSARKAVEIAMSCISPNAAERPGMSQILAELRECLSLEMVQRNNGNTRPRDKLVSVATVSETIPLAT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04344 606 SUPERFAMILY Protein kinase-like (PK-like) 282 570 IPR011009 -
Mepo1g04344 606 PANTHER OS07G0107800 PROTEIN-RELATED 1 574 - -
Mepo1g04344 606 SMART serkin_6 301 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04344 606 Gene3D Transferase(Phosphotransferase) domain 1 377 594 - -
Mepo1g04344 606 FunFam Leucine-rich repeat receptor-like protein kinase 279 376 - -
Mepo1g04344 606 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Mepo1g04344 606 Gene3D Ribonuclease Inhibitor 119 235 IPR032675 -
Mepo1g04344 606 Pfam Malectin-like domain 1 104 IPR024788 -
Mepo1g04344 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Mepo1g04344 606 Pfam Protein kinase domain 304 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04344 606 Gene3D Phosphorylase Kinase; domain 1 282 376 - -
Mepo1g04344 606 ProSiteProfiles Protein kinase domain profile. 301 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04344 Mepo-Chr1 50924126 50929032 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04344 1 605 Receptor kinase-like Gene Family AT3G46400 41.121 1.46e-147 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g04344 Pkinase 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04344 - - mtr:25500366 823.928