Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04342 ATGCAGGCGCAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGCTATTGTGATGAAGATGAAATCAAAGCATTGATATACGAATACATGGCCAATGGAAATGTTCAACAACACTTATTAAAGGAGAATACAAATATTTTAAAATGGAATGAGAGACTCAAAATTGCAGTTGATGCAGCACATGGATTGGAATATCTGCACAATGGATGTAATCCACCTATTATGCATAGAGATTTGAAGCCTACCAACATATTACTAGACGAGAATATGCATGCCAAGATAGCTGATTTTGGCCTAAGTAGAGCTTTTGGTAATGACATTGATTCTCATATATCCACCCAACCTGCTGGCACACTAGGTTATGTTGATCCTGCATATCAGAGAACGGGAAACACAAATAAAAAAAACGATATCTACAGCTTTGGAATAATTCTATTTGTGTTGATCACTGGTCGTCAAGCAATAGTAAGAGCAGCTGGAGAAAACATTCATATACTAGAATGGGTTATTCCTTTAGCTGAAGGAGGAAATATTCAAAGTGTTGTTGATCCAAGGTTGGAGGGTGAATTTAGCATCAATTCAGCATGGAAAGTTGCAGAGATAGCCATGTCATGCATTTTGCAAACTGCAGCTGAAAGGCCAGACATAAGCCAAATATTGGCAGGACTGAGGCAGTGTCTATCTATGGAGATGGTTTCTGTAGCTACTATATCAGAAACCATTGTTTTAGCTAGATAA 750 0.376 MQAQLLMIVHHRNLVSLIGYCDEDEIKALIYEYMANGNVQQHLLKENTNILKWNERLKIAVDAAHGLEYLHNGCNPPIMHRDLKPTNILLDENMHAKIADFGLSRAFGNDIDSHISTQPAGTLGYVDPAYQRTGNTNKKNDIYSFGIILFVLITGRQAIVRAAGENIHILEWVIPLAEGGNIQSVVDPRLEGEFSINSAWKVAEIAMSCILQTAAERPDISQILAGLRQCLSMEMVSVATISETIVLAR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04342 249 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04342 249 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 34 240 - -
Mepo1g04342 249 PIRSF ILK 2 236 - -
Mepo1g04342 249 SMART serkin_6 3 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04342 249 Pfam Protein tyrosine and serine/threonine kinase 3 225 IPR001245 GO:0004672|GO:0006468
Mepo1g04342 249 Gene3D Transferase(Phosphotransferase) domain 1 35 245 - -
Mepo1g04342 249 PANTHER OS07G0107800 PROTEIN-RELATED 2 231 - -
Mepo1g04342 249 SUPERFAMILY Protein kinase-like (PK-like) 3 225 IPR011009 -
Mepo1g04342 249 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Mepo1g04342 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04342 Mepo-Chr1 50917729 50920183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04342 1 235 Receptor kinase-like Gene Family AT4G29180 54.237 2.25e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g04342 PK_Tyr_Ser-Thr 6.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04342 - - mtr:25500366 429.098