Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04340 ATGGCGACACCGGGAATCGGAATGTTAGACGGCGGAGTACCAACGGCGCAACCACCGGGAACAGACATGACCGGAATATGCTTCAGAGATCAATTATGGCTAAACACATACCCACTCGATCGTAATCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCTAACAACGAACAACTCCGTATGCGTTCTCATCATCCACTCGATTCCTCTCAACTCACGAAAATGATTGGTATTGAATATGTGTTGAGTGAAGTTATGGAACCTCATCTTTTTATCATGAAGAAGCAGAAGAGGGATAGTCCTGATAAAGTTACTCCAATGCTTGCTTATTATATTTTGGATGGTTCTATTTATCAAGCTCCTCAATTATCCAATGTTTTTGCTGCTAGAATTGGAAGGGCACTATATTATATTGAAAAGGCATTTACTACGGCTGCATCTAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAACGAGACTACACTTCCGGAACCAAAGGCAGCTAAGGAGACAATTGACTTAAAAGAAATTAAACGAGTGGATCATATTCTTGCTTCCTTGCAACGCAAGCTTCCACCTGCTCCGCCTCCGCCACCATTTCCAGAAGGGTATGTTCCACCTTCAACAGCAGAAACTGAGAAAGGCCCTGAAACTCAGGAAGCAACTGAGTCACTAGCACCTACTGTTGATCCCATACTTGATCAAGGACCTGCAAAAAGAATGAAATTTTGA 747 0.423 MATPGIGMLDGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTLPEPKAAKETIDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEATESLAPTVDPILDQGPAKRMKF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04340 248 Gene3D Mediator complex, subunit Med6 20 149 IPR038566 -
Mepo1g04340 248 FunFam Mediator of RNA polymerase II transcription subunit 6 20 149 - -
Mepo1g04340 248 Pfam MED6 mediator sub complex component 26 151 IPR007018 GO:0003712|GO:0006357|GO:0016592
Mepo1g04340 248 PANTHER MED-6-RELATED 10 248 IPR007018 GO:0003712|GO:0006357|GO:0016592
Mepo1g04340 248 MobiDBLite consensus disorder prediction 193 248 - -
Mepo1g04340 248 PIRSF MED6_meta/plant 12 248 IPR016820 GO:0003712|GO:0006357|GO:0016592
Mepo1g04340 248 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04340 Mepo-Chr1 50882234 50886166 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Mepo1g04340 Med6 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04340 K15128 - gmx:100792248 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04340 1 50882234 50886166 Mepo1g04340 1 50882234 50886166 ECH