Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04339 ATGGTTCCTAGTGAGATCAGAGGAGTCAATTATCTAACTCCTCCTGAGAATTCATTCCAAGTTCAACCAAACTTTGTCTTGCCACACAATGAAATTCCAAATTACCATATAAATAATCTTTTAGGCAGTTTACCAAACTTCCATTACCCATCAGCAGGCCATGAATTTGCTCCACCATCATGTTTAAGCAGCAACTCGACTACTTCTGATGAAGCAGATGAACTTCAGTTTAACATCATCGACGAAAGGAAGCAGCGGCGAATGATATCAAACAGAGAATCAGCTAGGAGATCAAGGATGAGGAAACAAAAACACTTGGATGAACTTTGGTCACAAGTGATGAAACTCAGAACTGAAAATCACAACCTTGTTGACAAACTAAACCATGTGTCTGAGTCACATGACAAAGTTGTTCAAGAGAATGCACGCCTTAAAGAAGAAACTTTTGATCTTCGCCAAATGGTAGCTGACATGCAAATTGGTAACTCTTTTCCTTGCAACATGGAAGATTTATGTGAAATTCCATGCAACACATCTCAACACAAAGACGATTCTTCTAAAATTCATGATTGA 573 0.3839 MVPSEIRGVNYLTPPENSFQVQPNFVLPHNEIPNYHINNLLGSLPNFHYPSAGHEFAPPSCLSSNSTTSDEADELQFNIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVMKLRTENHNLVDKLNHVSESHDKVVQENARLKEETFDLRQMVADMQIGNSFPCNMEDLCEIPCNTSQHKDDSSKIHD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04339 190 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Mepo1g04339 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Mepo1g04339 190 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Mepo1g04339 190 Coils Coil 127 147 - -
Mepo1g04339 190 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 166 IPR044521 -
Mepo1g04339 190 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Mepo1g04339 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Mepo1g04339 190 Gene3D - 81 137 - -
Mepo1g04339 190 FunFam BZIP transcription factor 81 132 - -
Mepo1g04339 190 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04339 Mepo-Chr1 50878900 50879565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04339 61 174 bZIP Transcription Factor Family AT3G30530 71.552 5.58e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo1g04339 bZIP_1 6.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04339 - - gmx:100778078 279.256