Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04335 ATGTCGATGGTGAGCATGAAGATGTTAGGTGGTTTATTATTAGATTCAATAATCAATAGGTCGAAACATGAACATCTCTTTCAAGGAAAAAATAGCAAGGCAAAGTTCTTGACATGGGCAGACAGACTCGGAATAGCAGTGGATGCAGCCCAAGGATTCATTAGCATAGATTGTGGCCTACCAGAAAATTCAAACTACACTGAGAAGATCACAGGCATAAATTACATATCAGATGCTGAATTCATAAGAACAGGTGAAAATAACAGTATATCATCTGCAGAGAAGATTACTCATCAACAACAACTACATTTTGTACGGAGCTTTCCTAAGGGAGACAGAAACTGTTACAAAATAAATGTACATATTGGTATTCAATATTTAATCAGAGTTACTTTCTATTATGGAAACTATGATAATCTAAACAAGCCACCACAATTTGATCTTCATTTTGGAGCTAATGCATGGGGCACAGTGAAGTCCAATGCATCACGCCCCACAATCAAGGAGATCATTTACATACCATCACAATATTACATACAACCATGTCTTGTTAACACAGGCAAAGGGACTCCATTCATTTCAACTATAGAATTGAGGACTTTGAACAATGATTCTTATATCTCAGACTCAGATGAACCAGTAGTACTATCACTCTTCAGGAGATATGATTTAGGTTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATCTGGTCGCCCTATGAATCATCTAATGATTGGGCACGATTAAACACCTCACTTAACAATGATGATCTAGTTCAGGATCGTTATAAACCACCAGCAATTGTGATGAGCACTGCTGTTACATCATTAAATGCCAGTGCCCCTTTACAATTTCATTGGGATGCAGACAATGAAAATGACCAATACTACTCATATTTGCTCTTTAATGAGGTTGAGAAGCTGGCAGAAAATGAAACTAGAGCATTCAATATTACAATGAATGGAAACTTTTTGTACAATGTGATACCTACATACCGAAAAGTAGACACCGTATTCAGCACAAAACCTTTTGTTAGAGCCACAAGGTATCTATTTTCCATTTTTAAGACAGAGAGTTCAACCCTTCCACCCGTCTTCAGTGCCATTGAGATTTATAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAAGAGGATGTTGATGCTATCACAAACATCAAGGATGCTTATGGGGTGGCTAAAAATTGGCAAGGAGATCCATGTGGTCCTGTGAAGTATATGTGGGAAGGCCTAATCTGCATTACTGGTGATGGTAATAACCCGCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATAGCATCCTCCATATCAAAGCTCAATATGTTGCAGCACTTGGATTTATCAAACAATAACTTAAGCGGCCCCTTACCTGATTTTCTGACACAACTGCAGTCACTAAAAACATTAAACTTGGGGAAGAACAACCTCAACCTTACAGGTTCAGTTTCAAGTGCCCTACTTGAGAGATCAAAAGGAGGTTCACTGTTATTGAACCTGGATCAAAATCCAAATATTTGTGAACCTGGTTCATGCAACCAAAAGAGAAGTGATCGGAAAAAAAGTAATAAAATCATTCCTTTAGTAGCATCAATTGCTGGGACTTTTGTGCTCCTAGTCCTAGTAAGTGCAGCAGCTATCATCTGTGCCCTTATTAAGAAAAGAAAACCACAAGATGGGAACAGTCATGTGCAGTCAAATACTCCAAATGATTCACAATTGGAATCCAAGCAAAGACAATATACATATGATGATGTAGTCGAGATCACCAACAACTTCAATAGAGTTCTTGGTAAAGGTGGGTTTGGAACAGTTTATTATGGTCTAATCGATGACACTGAAGTAGCTGTCAAGATGCTTTCTAAATCATCAGTACATGGATTTGAACAATTTCTTTCAGAGGTCAAGCTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATTGGCTATTGCAATGAAGAAAACAATATAGGGCTCATTTATGAATATATGGCAAATGGAAACCTTGATGAACTTCTTGCAGGAAAAAATAGCAAGGCAAAGTTCTTGACTTGGGAAGACAGACTCGGAATAGCAGTGGATGCAGCCCAAGGACTGGAATATCTGCACCATGGTTGTAGGCCACCTATAATCCACAGAGATGTGAAAAGTACAAACATTTTATTAAATGAAAGCTTCCAAGCAAAATTGGCTGATTTCGGCCTATCCAAAAACTTTCCCACTGATGGTGGCACCCATTTGTCCACTGTTGTTGCAGGAACTCCAGGTTACCTAGATTATGAGTACATGACATCAAACAGGTTGACCGAGAAGAGTGACGTCTACAGCTTTGGAGTTGTTCTTTTGGAGATAATCACAAGTCAACCAGCCATAACAAAATCACCTGACAAGACTCACATAAGTCAATATGTTAGATCCATGTTTTATAATGGCGATATAAAGAATATTATTGACTCAAGATTACAACAAGATTTTGACACTAACACTGCCTGGAAAGCTGTTGACATAGGAATGGCTTGTGTGTCCACTAATTCTTCCGATAGGCCAAACATGAGTGAAGTAATGAATGGGCTAAAGGAGTGTTTGGCCGAAGAATTATCCCGAAAAAGGGTTGGTCGTTGTAAATCTAAAAAGGAAGATCCAATTGAATTGGTTCCCCTCAATCTTGATATTGAACTTGGTCCCCAAGCTAGGTAG 2757 0.3841 MSMVSMKMLGGLLLDSIINRSKHEHLFQGKNSKAKFLTWADRLGIAVDAAQGFISIDCGLPENSNYTEKITGINYISDAEFIRTGENNSISSAEKITHQQQLHFVRSFPKGDRNCYKINVHIGIQYLIRVTFYYGNYDNLNKPPQFDLHFGANAWGTVKSNASRPTIKEIIYIPSQYYIQPCLVNTGKGTPFISTIELRTLNNDSYISDSDEPVVLSLFRRYDLGSITNLEYRYKDDVYDRIWSPYESSNDWARLNTSLNNDDLVQDRYKPPAIVMSTAVTSLNASAPLQFHWDADNENDQYYSYLLFNEVEKLAENETRAFNITMNGNFLYNVIPTYRKVDTVFSTKPFVRATRYLFSIFKTESSTLPPVFSAIEIYKVKDFSQSETQQEDVDAITNIKDAYGVAKNWQGDPCGPVKYMWEGLICITGDGNNPPRITSLNLSSSGLTGEIASSISKLNMLQHLDLSNNNLSGPLPDFLTQLQSLKTLNLGKNNLNLTGSVSSALLERSKGGSLLLNLDQNPNICEPGSCNQKRSDRKKSNKIIPLVASIAGTFVLLVLVSAAAIICALIKKRKPQDGNSHVQSNTPNDSQLESKQRQYTYDDVVEITNNFNRVLGKGGFGTVYYGLIDDTEVAVKMLSKSSVHGFEQFLSEVKLLMRVHHKNLTSLIGYCNEENNIGLIYEYMANGNLDELLAGKNSKAKFLTWEDRLGIAVDAAQGLEYLHHGCRPPIIHRDVKSTNILLNESFQAKLADFGLSKNFPTDGGTHLSTVVAGTPGYLDYEYMTSNRLTEKSDVYSFGVVLLEIITSQPAITKSPDKTHISQYVRSMFYNGDIKNIIDSRLQQDFDTNTAWKAVDIGMACVSTNSSDRPNMSEVMNGLKECLAEELSRKRVGRCKSKKEDPIELVPLNLDIELGPQAR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04335 918 ProSiteProfiles Protein kinase domain profile. 609 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04335 918 Gene3D Ribonuclease Inhibitor 393 515 IPR032675 -
Mepo1g04335 918 Gene3D Phosphorylase Kinase; domain 1 596 683 - -
Mepo1g04335 918 SUPERFAMILY Protein kinase-like (PK-like) 588 876 IPR011009 -
Mepo1g04335 918 Pfam Malectin-like domain 56 380 IPR024788 -
Mepo1g04335 918 Pfam Protein tyrosine and serine/threonine kinase 611 876 IPR001245 GO:0004672|GO:0006468
Mepo1g04335 918 CDD STKc_IRAK 615 874 - -
Mepo1g04335 918 Pfam Leucine rich repeat 435 495 IPR001611 GO:0005515
Mepo1g04335 918 MobiDBLite consensus disorder prediction 579 595 - -
Mepo1g04335 918 Gene3D Transferase(Phosphotransferase) domain 1 684 899 - -
Mepo1g04335 918 SUPERFAMILY L domain-like 421 496 - -
Mepo1g04335 918 MobiDBLite consensus disorder prediction 576 595 - -
Mepo1g04335 918 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 684 891 - -
Mepo1g04335 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Mepo1g04335 918 ProSitePatterns Protein kinases ATP-binding region signature. 615 636 IPR017441 GO:0005524
Mepo1g04335 918 SMART serkin_6 609 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04335 918 FunFam Leucine-rich repeat receptor-like kinase 391 527 - -
Mepo1g04335 918 PANTHER OS07G0107800 PROTEIN-RELATED 54 882 - -
Mepo1g04335 918 PRINTS Leucine-rich repeat signature 482 495 - -
Mepo1g04335 918 PRINTS Leucine-rich repeat signature 461 474 - -
Mepo1g04335 918 FunFam Leucine-rich repeat receptor-like protein kinase 587 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04335 Mepo-Chr1 50789582 50814264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04335 43 918 Receptor kinase-like Gene Family AT1G51800 46.325 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g04335 Malectin_like 1.1e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04335 - - gmx:100779474 1133.24