Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04321 ATGGCGACAGTACCAGGGCCACTCATATGGGAGATCGTGAAGAAGAACAACTCTTTCTTGGTGAAGGAGTTTGGAAACAACACTCAGAGTGTTCAATTCAGCAGAGAGAGTAACAATCTCTACAACCTTAACTCCTACAACTTCTCTGGTCTGGCAAACAAGAAAACTGTGACCATTCAGCCTGCTGGTAAAGATCAGTCGGTGTTGTTGGCTACAACTAAGCCAAGGAAGCAGAACAAGCCTTCTGCTTTGTCTCACAAATCTATCATGAAGAAGGAGTTCCGCAGGATGGCAAAGGCCGTTCAAAATCAGGTGGCAGATAATTACTACAGGCCTGATCTGAAGAAGGCAGCTCTTGCAAGGTTGAGTGCAGTTCATAGAAGCCTCAAAGTTGCCAAGTCCGGTGTCAAGAAGAGGAACAGACATGCTTAG 432 0.4583 MATVPGPLIWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYNFSGLANKKTVTIQPAGKDQSVLLATTKPRKQNKPSALSHKSIMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRHA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04321 143 PANTHER 60S RIBOSOMAL PROTEIN L28 1 142 IPR002672 GO:0003735|GO:0005840|GO:0006412
Mepo1g04321 143 FunFam 60S ribosomal protein L28 5 133 - -
Mepo1g04321 143 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Mepo1g04321 143 Gene3D - 7 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04321 Mepo-Chr1 50655976 50658381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04321 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.028 2.23e-72 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04321 K02903 - gmx:100499921 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04321 1 50655976 50658381 Mepo6g04128 6 53436358 53440035 ECH
Mepo1g04321 1 50655976 50658381 Mepo1g04321 1 50655976 50658381 ECH
Mepo6g04128 6 53436358 53440035 Mepo1g04321 1 50655976 50658381 PCT