Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04311 ATGCAAGACCAAACAACATTTCAACCCATGAAACCAAATTTTCCAGAACAAGAACAACTCAAATGTCCACGTTGTGAATCAAGCAACACAAAATTCTGCTACTACAACAACTACAATCTCTCACAACCACGCCATTTCTGCAAAAACTGTAAAAGATATTGGACAAAAGGTGGTGCTTTGAGGAACATACCAGTTGGTGGTGGAACAAGAAAAGTCACAAAACGTTCATCAAATTCTAAACGTTCAACAACACCATCTTCATCTTCTCCATCAGCATCAACCACTTCTTCAGCAGCAAAAGTTTCAGCTTCAGTTTCAGAAACTGACCCGACCCAGATTCATGGTGACCCGGGTGAGAGAAATTTTGGTGGAGGGAGTTTTAGTTCACTTCTTGCATCAACTGAGCGGTTTGGAAACCTTTTTGAAGGTCTGAATTCAAATGGGTCGGGTTTGAAAATGGTGGAAATGGGTGAATTTGGTGAGAATTTGAACTGTGACCCGGTTGTGAATACGGATTTGGGTCATAACCCTGGTGGTAGAAATGGTGAATCAGAGATCTTTCTTGGTTTGCAAAATGGTGGTTCAAACTGTTGGAATGATAATCATGGTTGGTCTGATCTTGCTATATACACTCCTAGCTCAACTTATCAGTAG 654 0.4083 MQDQTTFQPMKPNFPEQEQLKCPRCESSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGALRNIPVGGGTRKVTKRSSNSKRSTTPSSSSPSASTTSSAAKVSASVSETDPTQIHGDPGERNFGGGSFSSLLASTERFGNLFEGLNSNGSGLKMVEMGEFGENLNCDPVVNTDLGHNPGGRNGESEIFLGLQNGGSNCWNDNHGWSDLAIYTPSSTYQ 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04311 217 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Mepo1g04311 217 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 133 IPR045174 GO:0003700|GO:0006355
Mepo1g04311 217 MobiDBLite consensus disorder prediction 64 125 - -
Mepo1g04311 217 MobiDBLite consensus disorder prediction 78 111 - -
Mepo1g04311 217 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Mepo1g04311 217 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04311 Mepo-Chr1 50546828 50548697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04311 5 141 C2C2-Dof Transcription Factor Family AT1G51700 57.343 2.86e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo1g04311 zf-Dof 6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04311 - - qlo:115988764 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04311 1 50546828 50548697 Mepo1g04311 1 50546828 50548697 ECH