Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04299 ATGGTAGACAGATTTTACAAAAATTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGACAATGGAATGGGTTGTTTTAAGGATTGAAGCACTTCAAAATATAACTGTCATCACGGCAGCTTTGTTGCTTATTCTACTTCCTCGTGGATATGTGTCCCCAGGCCTTGTGGGACTGTCTCTTTCTTATGCTTTTACTTTGACAGGAGCCCAAATATTTTGGACTCGATGGTTTTCCAACTTATCAAACAATATTATCTCTGTCGAAAGAATCAAACAATTCATTTACATACCAGCTGAGTATCCTGCTATTGTGGATAATAATCGACCTCTATCTTCATGGCCGTCCAAGGGAAAGATTGATCTTCAGGGATTAGAGATTAGATATCGTCCTAATGCTCCATTAGTTCTTAAGGGAATCACTTGTACGTTAAAAGAAGGAAGTAGGGTAGGAGTTGTTGGAAGAACTGGAAGTGGAAAAAGTACACTGATTAGTGCTTTGTTTCGCTTGGTTGAGCCTTCAAGAGGTGATATTCTCATAGATGGGATTAACATATGCTCAATCGGGTTGAAGGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATCAGGACGAACCTGGATCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAAGCTGTAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGACGGGGGAAATTGGAGCTTGGGACAAAGGCAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTTGTTCTGGATGAAGCAACAGCATCCATTGACTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACTGTTATAACTGTGGCTCACAGAGTTCCAACTGTCATAGACAGTGACATGGTCTTGGTCCTATCTTATGGGAAACTTGTGGAATATGACAAGCCTTCAAAGCTAATGGACACAAACTCTTCATTCTATAAGTTGGTTGCTGAATATTGGTCTAGCTGCAGGAAGAGTTCCTTCCCAAACATTAGCAGACAACAACAATGA 1134 0.4004 MVDRFYKNYLKLVDTDASLFFHSNVTMEWVVLRIEALQNITVITAALLLILLPRGYVSPGLVGLSLSYAFTLTGAQIFWTRWFSNLSNNIISVERIKQFIYIPAEYPAIVDNNRPLSSWPSKGKIDLQGLEIRYRPNAPLVLKGITCTLKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSIGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDDGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVLVLSYGKLVEYDKPSKLMDTNSSFYKLVAEYWSSCRKSSFPNISRQQQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04299 377 Gene3D - 108 359 IPR027417 -
Mepo1g04299 377 SMART AAA_5 151 344 IPR003593 GO:0016887
Mepo1g04299 377 FunFam ABC transporter C family member 3 108 359 - -
Mepo1g04299 377 SUPERFAMILY ABC transporter transmembrane region 2 107 IPR036640 GO:0005524|GO:0016020
Mepo1g04299 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 358 IPR027417 -
Mepo1g04299 377 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 127 359 IPR003439 GO:0005524
Mepo1g04299 377 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 361 - -
Mepo1g04299 377 CDD ABCC_MRP_domain2 123 343 - -
Mepo1g04299 377 Gene3D ABC transporter type 1, transmembrane domain 1 105 IPR036640 GO:0005524|GO:0016020
Mepo1g04299 377 Pfam ABC transporter 142 290 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04299 Mepo-Chr1 50392643 50394785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04299 123 368 Calmodulin-binding Proteins AT2G36910 32.046 1.32e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04299 - - gmx:100784827 617.461