Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04298 ATGATATTTCACTATAATGGAAATCAGGTTAATGTAGGTAGCGCACTAGCCTATGTTTCTCAATCTTCTTGGATACAAAGTGGAACAGTTCGAGATAATATACTCTTCGGCAAGCCAATGGACAAAGAAAAATATGAGAATGCCATTAAAGTATGTGCCTTAGATAAGGATATTGATGATTTTAGCTATGGTGATCTTACAGAAATAGGTCAGAGAGGGATTAACATAAGTGGAGGACAGAAGCAAAGAATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTCGATGATCCTTTCAGTGCAGTTGATGCACACACAGCTGCTATTCTGTTCAATGACTGCGTAATGACAGCCCTAAGAGAGAAAACAGTAGTTTTAGTGACGCATCAAGTGGAGTTTCTCTCGGAAGTTGATACAATATTGGTAATGGAGGATGGAAACGTTATTCAATCGGGCAGTTATCAGAATCTCTTGAAAGCTGGGACATCCTTTGAACAACTTGTGAACGCTCATAAAGACATAGTTACTGAGCTACATCAAGATAATGAAAATAAAGGAGTTTCGGAAAATGATGTTTTGGCTAATCCACAAAATCAGAACGAGGGGGAGATTTCTACCATGCGTCAAATTGAGGTACAACTTACAAAAGAAGAAGAAAAAGTGATTGGTGATGTTGGTTGGAAGCCATTCTGGGATTATATTTCTTTTTCCAGGGGATCATTCATGTTGTGTTTTATCGTGTTAGCACAATCCGCATTTATAGTTTTGCAGACTGCATCCTCCTTTTGGCTTGTTATTGCCATTGAAATTCCAAACGTATCTAGTGCCACCTTGATTGGAGTATATTCAATAACTTCTTTTGCTAGCATTTTGTTTGTATATCTGAGGTCTTACTTGAATGCACATCTCGGATTAAAAGCTTCGAATGCATTCTTCTCAAGCTTCACTAAAGCTATCTTCAATTCTCCAATGCTTTTCTTTGATTCGACCCCTGTAGGAAGGATTTTAACCCGAGCTTCATCAGATTTAAGTATTTTGGACTTGGACATGCCTCATTCCATCCTCTTTGCATTATCTGTAGCAATTGAAATTCTGGTAATAATTTGCATAATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGTAATGGTGGCATCAATATTCATTCAGCAATATTATCAAGCAACTGGAAGGGAACTAATGCGGATCAATGGAACCACCAAAGCTCCAGTCATGAATTTTGCAGCAGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGGTAGATGAATTTTACAAAAACTACTTAAAACTTGTGGACAAAGATGCTTCATTATTCTTTCATTCTAATGTGGCAATGGAATGGATGGTTATAAGGATTGAAGCACTTCAAAATTTAACTATCATCACCGCAGCTTTGTTGCTAATTCTTGTTCCTCGTGGATACGTGTCCCCAGGACTTGTGGGACTGTCTCTTTATTATGCTTTAATTTTGACAACAGCCCTAATATTTTGGACTCGATGGTTTTCCAACTTATCAAACTACATTATCTCTGTTGAAAGAATCAATCAATTCATTCACAGTCCATCCGAGCCTCCTGCCATTGTGGAGGATAACCGACCCCCTTATTCATGGCCTTCTAAGGGTAGGATTGATGTTCAAGGATTAGAGGTTAGATATCGTCCGAACGCTCCATTAGTCCTCAAGGGAATCACTTGTACATTTCAAGAAGGGAGTAGGGTGGGAGTTGTTGGAAGGACTGGTAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAAAGGTGATATTCTCATAGATGGGATAAACATATGCTCAATCGGGTTGAAGGATTTGAGAACTAAGCTAAGCATCATTCCTCAAGAACCAACACTCTTCAAGGGCAGCATTAGGACAAACCTTGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTGTAGAAAAATGTCAATTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGACAGCGCCAACTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGGAACAGGATTCTAGTTTTGGATGAAGCTACTGCATCCATTGACTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCTGAATGCACGGTTATAACCGTTGCTCACAGAATCCCAACTGTAATAGACAGTGACATGGTCATGGTTCTATCTTATGGGAAACTGATGGAATACGATGAGCCTTCAAAGCTAATGAACACAAAGTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCTAGCTGCAGGAAGAGTTCCTTCCCAAACAATAGAAGACCGAAACTATGA 2442 0.3939 MIFHYNGNQVNVGSALAYVSQSSWIQSGTVRDNILFGKPMDKEKYENAIKVCALDKDIDDFSYGDLTEIGQRGINISGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVVLVTHQVEFLSEVDTILVMEDGNVIQSGSYQNLLKAGTSFEQLVNAHKDIVTELHQDNENKGVSENDVLANPQNQNEGEISTMRQIEVQLTKEEEKVIGDVGWKPFWDYISFSRGSFMLCFIVLAQSAFIVLQTASSFWLVIAIEIPNVSSATLIGVYSITSFASILFVYLRSYLNAHLGLKASNAFFSSFTKAIFNSPMLFFDSTPVGRILTRASSDLSILDLDMPHSILFALSVAIEILVIICIMVSVTWQVLIVAVPVMVASIFIQQYYQATGRELMRINGTTKAPVMNFAAETSLGVVTVRAFNMVDEFYKNYLKLVDKDASLFFHSNVAMEWMVIRIEALQNLTIITAALLLILVPRGYVSPGLVGLSLYYALILTTALIFWTRWFSNLSNYIISVERINQFIHSPSEPPAIVEDNRPPYSWPSKGRIDVQGLEVRYRPNAPLVLKGITCTFQEGSRVGVVGRTGSGKSTLISALFRLVEPSKGDILIDGINICSIGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQFKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRIPTVIDSDMVMVLSYGKLMEYDEPSKLMNTKSSFSKLVAEYWSSCRKSSFPNNRRPKL 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04298 813 FunFam ABC transporter C family member 3 544 795 - -
Mepo1g04298 813 Gene3D - 544 795 IPR027417 -
Mepo1g04298 813 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 15 797 - -
Mepo1g04298 813 ProSitePatterns ABC transporters family signature. 76 90 IPR017871 GO:0005524|GO:0016887
Mepo1g04298 813 SUPERFAMILY ABC transporter transmembrane region 232 543 IPR036640 GO:0005524|GO:0016020
Mepo1g04298 813 Pfam ABC transporter transmembrane region 260 512 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04298 813 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 563 795 IPR003439 GO:0005524
Mepo1g04298 813 FunFam Multidrug resistance-associated protein 4 2 190 - -
Mepo1g04298 813 CDD ABC_6TM_ABCC_D2 243 536 IPR044726 GO:0140359
Mepo1g04298 813 Gene3D ABC transporter type 1, transmembrane domain 209 542 IPR036640 GO:0005524|GO:0016020
Mepo1g04298 813 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 174 IPR003439 GO:0005524
Mepo1g04298 813 CDD ABCC_MRP_domain1 9 150 - -
Mepo1g04298 813 Pfam ABC transporter 578 726 IPR003439 GO:0005524
Mepo1g04298 813 SMART AAA_5 587 772 IPR003593 GO:0016887
Mepo1g04298 813 Gene3D - 2 197 IPR027417 -
Mepo1g04298 813 CDD ABCC_MRP_domain2 559 779 - -
Mepo1g04298 813 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 249 524 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g04298 813 FunFam ABC transporter C family member 5 211 542 - -
Mepo1g04298 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 174 IPR027417 -
Mepo1g04298 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 794 IPR027417 -
Mepo1g04298 813 Pfam ABC transporter 13 103 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04298 Mepo-Chr1 50386266 50389787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04298 559 810 Calmodulin-binding Proteins AT2G36910 30.233 2.02e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04298 - - gmx:100784827 1269.6