Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04292 ATGAGTCGAGAGCAGCAGAAGAAGGGGAAACAAGAGAAAGGCTGTGATGGTGCTGAGAAGGTTATTGTTGCTGTCAAGGCATCGACAAAGGAAATTCCGAAGACAGCTCTTGTTTGGTCACTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTTCTAGTGGTTGTTCCTTCACAAAGTTCAGGTAGAAAATGGGGTTTTCCAAGATTTGCTGGTGACTGTGCCAGTGGTATTAAGAAGTATCCTCCAGGAACAATTTTAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTTCCGGATCACCTTGCGGATCAGTGGCTGCAGAAGCCAAGAAAGGACAAGCTAGTTGGGTTGTATTAGACAAACATCTCAAGCCTGAGGAAAAGAAATGCATGGAAGAGCTGCAGTGTAACATTGTTGTTATGAAGCGTGCTCAACCGAAAGTGCTTCGCTTGAACTTGATTGGACCAAAAAAGAAGGAAGTTGAAGAAGCATGTACATCACCTTCTGTGCAAGACGATATGCTTGAAAAGAAAACCAAAAATAAGATTGATTCTTTAGTTGATTCTATCAAAGGACCAAATGTTACTCCAACTAGCAGCCCTGAGTTAGGTACACCATTCACTACTACTACTGAGGCCGGTACTTCATCAGCTTCAAGCTCTGATCCTGGAACATCACCGTTCTTTATCTCAATGAATAGTGAGTCGAAGAAAGAGGAAACCATCAAGGAAAGTCAAGAACTTTGTGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCCGCTAGCTTTAGATACCAGCCGTGGATCACGGAATTGCTTTTACATCAACAATCATCTCAACACAACGAGGAAAGATCAGATCCTTATCACGGTATGCCTCAAGCAACTACAACCAAAGCCTTGCTAGAAAAGTTTTCTAGGCTTGATAGAGGAGCTGGAATTGAAATGTCGGCAGCATACAGAAAGGACTCAGATTTTAGTGGTAATTTAAGAGAAGCAATAGCATTGTCAGGAAATGCTCCACTTGGTCCACCTCCATTGTGTTCAATATGTCAACACAAGGCACCTGTATTTGGAAAACCTCCGAGGTGGTTCAGCTATGCTGAGTTGGAACTTGCTACCGGTGGATTTTCACAAGCTAACTTCTTGGCAGAAGGAGGGTATGGTTCTGTTCACCGAGGGGTTCTACCAGAAGGACAGGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATGTTGAGTTTTGCTCCGAGGTAGAAGTTCTGAGCTGTGCTCAGCACCGGAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGGCAAAGGGATCCATTAGAATGGTCCGCAAGGCAGAAAATTGCTGTTGGAGCTGCTCGTGGGTTAAGGTATCTTCATGAAGAGTGCAGAGTAGGTTGTATCATCCACCGTGACATGAGGCCAAACAATATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACATGGGTGTGGATACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTATATTCCTTTGGGGTGGTACTGGTGGAGCTTGTTACTGGTAGAAAAGCTGTTGATCTCACCAGGCCCAAGGGACAACAGTGCCTTGCTGAGTGGGCACGACCACTGTTAGAAGAATATGCCATTGACGAACTGATTGACCCAAGGCTGGGAGGTCACTATTTAGAACATGAGGTCTATTGCATGCTTCATGCTGCTTCATTATGCATAAGGAGAGATCCTCATTCTAGACCACGGATGTCACAGGTTCTCCGAATTCTAGAGGGTGATATGGTGGTGGACGCAAATTACATTTCAACTCCAGGCTATGATGTTGGAAACAGGAGCGGTCGCCTTTGGTCAGAGCCACTGCAGAGGCAGCACCATTACAGTGGTCCCCTCTTAGAAGATTCATTGGAGTCATCATTCAGCGGAAATCTATCTCTTGACAAGTACAAACCTGCTTCCTTTTGGGATAGGAACAGGGACAAGCCAAGAAGGGCATCATGTGAAGGTGATACTTGA 2268 0.4387 MSREQQKKGKQEKGCDGAEKVIVAVKASTKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKWGFPRFAGDCASGIKKYPPGTILEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGSVAAEAKKGQASWVVLDKHLKPEEKKCMEELQCNIVVMKRAQPKVLRLNLIGPKKKEVEEACTSPSVQDDMLEKKTKNKIDSLVDSIKGPNVTPTSSPELGTPFTTTTEAGTSSASSSDPGTSPFFISMNSESKKEETIKESQELCDTNSDTESESLSTSSASFRYQPWITELLLHQQSSQHNEERSDPYHGMPQATTTKALLEKFSRLDRGAGIEMSAAYRKDSDFSGNLREAIALSGNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLAEWARPLLEEYAIDELIDPRLGGHYLEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVVDANYISTPGYDVGNRSGRLWSEPLQRQHHYSGPLLEDSLESSFSGNLSLDKYKPASFWDRNRDKPRRASCEGDT 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04292 755 PANTHER OS01G0750732 PROTEIN 228 682 - -
Mepo1g04292 755 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 481 684 - -
Mepo1g04292 755 SUPERFAMILY Protein kinase-like (PK-like) 389 682 IPR011009 -
Mepo1g04292 755 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672|GO:0006468
Mepo1g04292 755 FunFam Dual-specific kinase DSK1-like 12 166 - -
Mepo1g04292 755 CDD STKc_IRAK 411 677 - -
Mepo1g04292 755 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Mepo1g04292 755 Gene3D Transferase(Phosphotransferase) domain 1 481 686 - -
Mepo1g04292 755 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 377 480 - -
Mepo1g04292 755 MobiDBLite consensus disorder prediction 212 288 - -
Mepo1g04292 755 ProSiteProfiles Protein kinase domain profile. 405 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04292 755 MobiDBLite consensus disorder prediction 215 259 - -
Mepo1g04292 755 Gene3D HUPs 4 166 IPR014729 -
Mepo1g04292 755 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Mepo1g04292 755 MobiDBLite consensus disorder prediction 260 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04292 Mepo-Chr1 50308909 50315063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04292 344 671 Trihelix Transcription Factor Family AT1G68690 50.000 1.29e-102 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo1g04292 PK_Tyr_Ser-Thr 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04292 - - cam:101503019 1342.41