Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04288 ATGGAGGAAACACCTACACTTCTTCATGGAACAATTGAAGCTACCATCTTCAATGCCTCACCCTACACATCATTTTTCCCCTTCAACTGCATATGTTCAAATGGAGAGCCTGCTTATGTAACCATCAATATAGACAACAAGAAGGTTGCAAAAACAAGCAAAGAAAGAAATCGTGTTTGGAACCAAACCTTTCATATTCAATGTGCTCATCCTGTTGATTCAGTTATCACCATTACATTGAAAACATTAAATTCAAAATTAGGAAAATATAATATCAAGGCCCAACAACTTTTGAAGGAAGGAAGTATAATCAATGGAATATTTCCTCTCCTCATGGAAAATGAAAAACCAAACCCAAAACTTAAATTGAAATTTATATTATGGTTTAAGCCTGCAATATTGGAACAAAGTTTGGCAAAGGTACTAAGCAATAAGGAATTTCAAGGGTTACAGGATGCAAAATTTCCATTAAGGTCTAATTGTCAAGTCAAACTTTATCATGATGCTCATCACTCTCCTACCTTCCAACCTCCCTTTGATCCATGTGGTACTCCAACAAATCTATGGGAAGATGTCTATAAAGCCATTGAGGGTGCAAAACATATAGTTTATATTGCAGCTTGGTCCCTAAATCCCAAGATGGTTTTGGTTAGAGATCCCCATACAAAAATCCAACATGCTAGAGGAATGACTTTGGGTGAGCTATTGAAAAAGAAAGCAGATGAAGGAGTGGCTGTAAGAGTTATGCTTTGGGATGATGAAACATCTTTGCCCTTTATTAAGAACAAAGGTCTTATGAACACACATGATGAGGACGTTCTTACATATTTCAACCACACAAAAGTAATATTCAAAAAATGTCCTAGATTACACCACAAATTCCCAACACTATATACTCACCATCAGAAAACTATAATAGTAGACACCAAAGTGCTTAAATCTGTCAGTGATAGACAAATTATGAGCTTTGTTGGTGGATTAGATTTATGTGATGGTAGATATGATACTGAACAACATTCGTTGTTTCAAACACTCATTAAGGAATCACATTGTTATGATTTTTACCAACCAAACATTCAAGGAGCTAACCTTAACAAAGGAGGACCAAGAGTGCCTTGGCATGATGCTGATGCTTGTGTTATTGGTGAAGCTGCTTGGGATGTGTTAACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCATTTCTAGTTCCTACTAGCACCTTGGTGAATTTCATTCCTCAAACAAACTCAAACACTTCAATAGAAAGTAATTGGAAAGTTCAAGTTTATAGGTCTATTGATCATACTTCTGTTGATGATTTTTGTGGAAATTTCAATGTTGAGAGTAGCATCCATGAAGCTTATGTTCAAGCAATCAGGCATGCTGAGAGGTTTATATACATTGAAAACCAATACTTTATTGGAGGATGCCAATGGTGGGAAAAAGATAAGCATTGTGGATGCACAAATCTAATTCCAATTGAAATTGCACTTAAGGTGGTAAGTAAGATCAAAGCAAAAGAGAGATTTGCAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAATCTGTTCAAGATATATTGCATTGGACAAGAGAAACTGTGGCAATGATGTATAGGTTGATTGGTGAAGCAATAAAAGAAAGTGGTGACATAGGACATCCAAGAGACTACTTGAATTTCTTTTGTCTTGCAAATAGAGAACATAAGGGAAAAGGAGAGTATCTTCCATTGGATTCTCCTCATCCTGAAACACAATACTGGAATGCACAAAAAAATAGAAGATTTATGGTTTATGTTCATTCCAAGCTCATTATAGGTACTATTATTATTCTTTTAGTGTTTATCAGTTATTTTATTTTCCACTTTTTAGCCTTTACACTTGCATTACTCAAAGGAAATTTGGATACTTGTGTCCCGACCTCAACTCAGTTGCACCGTTATTATGATGTATTATCCATTTTTGGATCTTGTACTGTTTTGTTGCATGTATGTATGTCACCAGTGGATGACATGTACATATTAATAGGTTCAGCTAATATGAACCAAAGATCCATGGATGGAAAAAGGGACACTGAGATAGCCGTAGGATGCTTCCAATCTCAAGATGAAGTGGAGAAACAAATGAACCTTGGTGATGTTCATGCATACAGAATGGCACTATGGTATGAGCACACAAATAGTGTTGATGAATTGTTCTTAGAGCCACAAAGTTTGGAATGTGTGAAAAGAATGTGTTCAATTGGAGATCAAATGTGGGAAATCTACAACAATGAAGAAATTGTAGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGGATAACACAAGAAGGGTATGTGAATGACTTGAGTAATGGAGTTTATTTTCCTGACACAGATTCTCTAGTGAAGGGGAAGAGATCTACATTGTTGCCCCCTAACTGGACTACTTAA 2463 0.3618 MEETPTLLHGTIEATIFNASPYTSFFPFNCICSNGEPAYVTINIDNKKVAKTSKERNRVWNQTFHIQCAHPVDSVITITLKTLNSKLGKYNIKAQQLLKEGSIINGIFPLLMENEKPNPKLKLKFILWFKPAILEQSLAKVLSNKEFQGLQDAKFPLRSNCQVKLYHDAHHSPTFQPPFDPCGTPTNLWEDVYKAIEGAKHIVYIAAWSLNPKMVLVRDPHTKIQHARGMTLGELLKKKADEGVAVRVMLWDDETSLPFIKNKGLMNTHDEDVLTYFNHTKVIFKKCPRLHHKFPTLYTHHQKTIIVDTKVLKSVSDRQIMSFVGGLDLCDGRYDTEQHSLFQTLIKESHCYDFYQPNIQGANLNKGGPRVPWHDADACVIGEAAWDVLTNFEQRWTKQCDPSFLVPTSTLVNFIPQTNSNTSIESNWKVQVYRSIDHTSVDDFCGNFNVESSIHEAYVQAIRHAERFIYIENQYFIGGCQWWEKDKHCGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVPESESVQDILHWTRETVAMMYRLIGEAIKESGDIGHPRDYLNFFCLANREHKGKGEYLPLDSPHPETQYWNAQKNRRFMVYVHSKLIIGTIIILLVFISYFIFHFLAFTLALLKGNLDTCVPTSTQLHRYYDVLSIFGSCTVLLHVCMSPVDDMYILIGSANMNQRSMDGKRDTEIAVGCFQSQDEVEKQMNLGDVHAYRMALWYEHTNSVDELFLEPQSLECVKRMCSIGDQMWEIYNNEEIVDMEGVHLVTYPMRITQEGYVNDLSNGVYFPDTDSLVKGKRSTLLPPNWTT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04288 820 SUPERFAMILY Phospholipase D/nuclease 419 614 - -
Mepo1g04288 820 SMART pld_4 296 333 IPR001736 GO:0003824
Mepo1g04288 820 SMART pld_4 666 693 IPR001736 GO:0003824
Mepo1g04288 820 Coils Coil 80 100 - -
Mepo1g04288 820 Gene3D C2 domain 32 129 IPR035892 -
Mepo1g04288 820 Pfam C2 domain 38 110 IPR000008 -
Mepo1g04288 820 PIRSF PLD_plant 657 820 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mepo1g04288 820 PIRSF PLD_plant 5 620 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mepo1g04288 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Mepo1g04288 820 PANTHER PHOSPHOLIPASE D 7 614 IPR015679 -
Mepo1g04288 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 125 IPR035892 -
Mepo1g04288 820 Pfam Phospholipase D C terminal 738 809 IPR024632 -
Mepo1g04288 820 SUPERFAMILY Phospholipase D/nuclease 670 750 - -
Mepo1g04288 820 SUPERFAMILY Phospholipase D/nuclease 147 404 - -
Mepo1g04288 820 Gene3D Endonuclease Chain A 175 426 - -
Mepo1g04288 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 666 693 IPR001736 GO:0003824
Mepo1g04288 820 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04288 Mepo-Chr1 50288771 50294666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04288 668 820 Phospholipase D Gene Family (Wang group) AT1G55180 53.503 1.26e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04288 K01115 - gmx:100812642 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04288 1 50288771 50294666 Mepo1g04288 1 50288771 50294666 ECH
Mepo6g04118 6 53340575 53344260 Mepo1g04288 1 50288771 50294666 PCT