Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04286 ATGCAGTTAATGGGAGAGTCTTCTATTTTGCTCATCAATGGAACCTTGCAAAGGAGAATACATGGACTTATTGGTGCTTTCTTCAAGTCTCAACAATTAAAGGTTCAGATTACCTCAGATATGCAGAAGTATGTACAAGAATCAACGGCAAATTGGAAAGAGGACCAACCTATATACATACAAGATGAAACAAAAAAGATTGCCTTTCATGTACTAGTTAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACTACTAAAAAAACATTTTCAGGAATTTATCTCTGGCCTAATGTCTTTGCCAATAAACCTACCAGGAACTAAACTCTATCAGTCATTACAGGCAAAAAAGAAAATGGTGAAATTAGTGAGAAAAACTGTCCAAGCTAAAAGAAATAAAGGCATCTTTGAAGTTCCAAGAGATGTAGTGGATGTGCTTCTTAATGATACAAGTGAGAAATTGACAGATGACTTAATAGCAGATAATATTATTGATATGATGATTCCTGGAGAGGACTCAGTGCCAGTTCTTATGACTCTAGCAACAAAATACCTATCAGAATGCCCTCTTGCTTTACAACAATTGACGGTGGAGAATATAAAGCTCAAGAAACTCAAAGATCAGCTTGGGGAGCCTTTGTGTTGGAATGATTACTTATCATTGCCATTTACTCAAAAAGTAATCACAGAAACTTTGAGAATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGATGGTGCGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAACTATGAGTGCCCATATCAATTCAATCCATGGAGGTGGCAAGATAAGGACATGAACAGTTACAATTTCACTCCTTTTGGAGGAGGACAAAGGCTGTGTCCTGGTCTTGACTTGGCAAGGTTGGAAGCTTCCATCTTTCTGCATCACCTTGTTACACAATTCAGATGGTATGCAGAAGAAGATACAATAGTGAACTTCCCCACAGTAAGAATGAAAAGAAAGATGCCTATCTTAGTAAGGAGAGTGGAACCTTAG 1083 0.3675 MQLMGESSILLINGTLQRRIHGLIGAFFKSQQLKVQITSDMQKYVQESTANWKEDQPIYIQDETKKIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRKTVQAKRNKGIFEVPRDVVDVLLNDTSEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPLALQQLTVENIKLKKLKDQLGEPLCWNDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFANFRSVHLDEKNYECPYQFNPWRWQDKDMNSYNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRKMPILVRRVEP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04286 360 Pfam Cytochrome P450 93 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 302 311 IPR017972 GO:0005506|GO:0016705
Mepo1g04286 360 PRINTS E-class P450 group I signature 227 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 PRINTS E-class P450 group I signature 299 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 PRINTS E-class P450 group I signature 267 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 PRINTS E-class P450 group I signature 160 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 PRINTS E-class P450 group I signature 309 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 SUPERFAMILY Cytochrome P450 4 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo1g04286 360 CDD CYP90-like 1 357 - -
Mepo1g04286 360 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 1 358 - -
Mepo1g04286 360 PANTHER CYTOCHROME P450 26 3 333 - -
Mepo1g04286 360 Gene3D Cytochrome P450 1 358 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04286 Mepo-Chr1 50272367 50277020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04286 2 331 Cytochrome P450 AT3G13730 67.463 3.56e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04286 K12638 - gmx:100797868 634.024