Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04276 ATGGGAGTGTTTCTAATTTTTCTGATATTTATGCTACATTTTGTCCTCAGTAATCAACAGCTTCATGAGTTTTCAGACACCAATCTACCCCATTTCAGAACCAGAATTCATTTAAGTATTGCAGTCCCACCAACAGTGTCATCTTCTCGTGTTCCTTCAAGTATTGCACAACCACCTGACAAGTCAACGTTCGGCGTTCCAAGAAGTATTGCATTTCCACATTCGAAGTCACCTGACAAAGCTCCTAGAAAGGTATGGAAACATGGTTCATTGGATTCTCCAATATCACATCACAAGCATCATCATCATTCCGGAATAAAGAACGAAAATCGTACTCCAGGGCCGAACTCTCCAATCCAGGCTCCTTCTTACAGCAGTCAAGGTCCTTCAGTTTTCAAAGCACAACCTCCTTTCTCTTTACCGAAGAGCAAGTTTATCCATGCACCTGCACCATCACCAGCATTTTGGTCAGGCCATCTGGATGCGCCGTCTCCTTTGCCTAGAATTTCACCTCTAGGTTCACCATTGAACAAGATTAAGACTCCACCACCAGCATATACATTGGTTCTTCCCCCTCCACCTCCTAATAAAGATTGCTTGTCAGTTACTTGTTCGGAGCCGTTGACATACACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCCGCATTGGTATTTCAATATACAAGTGTTTTCCTCTTGTTTCAAAGCTAGCTGATGAAATTGCAGCGAGTGCTATGCTGAACCATACACAAGTTCGTATTATGGGAGCTGATGCAGCTAATCAGCAACTAGATAAGACCAATATCATCATAAACTTGGTACCTAAAGGCGTAAAATTTGACAATACTGCAGCATTTTTAATATACAAGAAATTCTGGCACAGGGACATTCTAATAGATGATTCCCTCTTTGGTGCTTATGAAGTACTTTATGTTCATTATCCAGGTCTTCCACCATCTCCCCCTTCAATTCCCTCAGGTGTTTCTAGTATAGATGATGGTCCAAATCCAGGTCGTGACAATAACGGAATGATGATGAAACCTTTAGGAGTAGCTTTACCAAACAAAGAGAAAGAAGGGAGCAACGGAAGAATGGTTTTTATAATTGTACTGTCATCAATTACTGCTTTTGTTCTATTCTTTGGACTTGCTTGGCTTTGTCTGTTGAAATACAGTTCTTGTATTCATCAACATGAACACGTTTCAGATAGCTTAATGTCAACTTCTTCAAAACAGTTAAGGGTTGCCGGGTCATTAAATCATGGGATCATGTCAGGATCTGGATCACGATCCTTCAATTCAGGAACGATAGCATATACAGGGTCCGCCAAGAATTTTACCTTGAATGACTTGGAGAAAGCAACAAATAACTTTGACACTTCTAGAATATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGAGACGTAGCAGTAAAGATTCTCAAAAGAGAAGATCGGCATGGTGGCCGCGAATTCCTAGCAGAAGTTGAGATGCTTAGCCGACTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAAACTCGTTGCCTAGTGTACGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTGCATGGTGCTGACAAGGAAAACGATCCATTGGATTGGAATGCTCGGATGAATATTGCTCTTGGTGCAGCTCGGGGATTGGCTTATCTGCACGAAGATTCCAATCCTTATGTCATACACCGGGACTTCAAGTCCAGTAACATCTTGTTGGAACATGATTTTACAGCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCTCTGGAAGATGGAAACAAGCACATCTCCACACATGTCATGGGAACATTCGGCTACTTAGCTCCTGAATATGCAATGACAGGCCATCTTCTCGCCAAAAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTTCTAACTGGTAGAAAGCCTGTGGATTTGTCACAACCAGCAGGTCAAGAAAATCTCGTGACATGGGTCCGTCCACTTCTCACGAGTAACGAAGGCTTGCAAACGATCATAGACCCAGTTGTAATGCCAAACATATCAATTGATACTGTCGTAAAGGTTGCAGCGATTGCGTCCATGTGCGTTCAACCAGAAGTATCTCAACGGCCTTTCATGGGAGAAGTTGTTCAAGCATTGCAGCTTGTATGCAGCGAGTTTGAGGAAACAAACTTTAAAAGGTCAGATAGTTTTCAAAAAGAGAGTCTTGTAACTAATGTCGAAGGTAAGTTTTTCGAGGTTTCAGATGAAAGAGTGGAGTTTTCGGAGTATCAAAAAACACTTCATGCCTATCAATCTGGTGATGAAAAGTTAAGATTATCAGATTCAGAGTTGCTCAGCACTTCAGGTCAAGAATTTGAGTCATTCAGGAGACAATCCAATTCAGGGCCTATTACCACCGAGAAGAAAAGACATTTCTGGCAAAATTTGAGAGGTTTGTCTAAAGGTAGCACAAGTGAACAAGGATTTTCAACTAAACTATGGCCTGGATCCCATTAA 2571 0.4158 MGVFLIFLIFMLHFVLSNQQLHEFSDTNLPHFRTRIHLSIAVPPTVSSSRVPSSIAQPPDKSTFGVPRSIAFPHSKSPDKAPRKVWKHGSLDSPISHHKHHHHSGIKNENRTPGPNSPIQAPSYSSQGPSVFKAQPPFSLPKSKFIHAPAPSPAFWSGHLDAPSPLPRISPLGSPLNKIKTPPPAYTLVLPPPPPNKDCLSVTCSEPLTYTPPGSPCGCVWPLQVKLRIGISIYKCFPLVSKLADEIAASAMLNHTQVRIMGADAANQQLDKTNIIINLVPKGVKFDNTAAFLIYKKFWHRDILIDDSLFGAYEVLYVHYPGLPPSPPSIPSGVSSIDDGPNPGRDNNGMMMKPLGVALPNKEKEGSNGRMVFIIVLSSITAFVLFFGLAWLCLLKYSSCIHQHEHVSDSLMSTSSKQLRVAGSLNHGIMSGSGSRSFNSGTIAYTGSAKNFTLNDLEKATNNFDTSRILGEGGFGLVYKGVLNDGRDVAVKILKREDRHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGADKENDPLDWNARMNIALGAARGLAYLHEDSNPYVIHRDFKSSNILLEHDFTAKVSDFGLARTALEDGNKHISTHVMGTFGYLAPEYAMTGHLLAKSDVYSYGVVLLELLTGRKPVDLSQPAGQENLVTWVRPLLTSNEGLQTIIDPVVMPNISIDTVVKVAAIASMCVQPEVSQRPFMGEVVQALQLVCSEFEETNFKRSDSFQKESLVTNVEGKFFEVSDERVEFSEYQKTLHAYQSGDEKLRLSDSELLSTSGQEFESFRRQSNSGPITTEKKRHFWQNLRGLSKGSTSEQGFSTKLWPGSH 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04276 856 MobiDBLite consensus disorder prediction 331 350 - -
Mepo1g04276 856 PANTHER OS01G0750732 PROTEIN 191 755 - -
Mepo1g04276 856 Pfam Protein tyrosine and serine/threonine kinase 466 737 IPR001245 GO:0004672|GO:0006468
Mepo1g04276 856 CDD STKc_IRAK 470 738 - -
Mepo1g04276 856 SUPERFAMILY Protein kinase-like (PK-like) 445 738 IPR011009 -
Mepo1g04276 856 Gene3D Transferase(Phosphotransferase) domain 1 540 766 - -
Mepo1g04276 856 FunFam receptor-like serine/threonine-protein kinase ALE2 437 539 - -
Mepo1g04276 856 ProSiteProfiles Protein kinase domain profile. 464 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04276 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Mepo1g04276 856 Gene3D Phosphorylase Kinase; domain 1 437 539 - -
Mepo1g04276 856 MobiDBLite consensus disorder prediction 77 93 - -
Mepo1g04276 856 MobiDBLite consensus disorder prediction 109 130 - -
Mepo1g04276 856 FunFam Receptor-like serine/threonine-protein kinase ALE2 540 758 - -
Mepo1g04276 856 MobiDBLite consensus disorder prediction 49 130 - -
Mepo1g04276 856 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04276 Mepo-Chr1 50180177 50185349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04276 196 851 Receptor kinase-like Gene Family AT5G56890 57.251 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mepo1g04276 PK_Tyr_Ser-Thr 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04276 - - gmx:100814040 1285.4