Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04274 ATGGTTATGGCTTCTTCTTCCTCTCACGATGCTTCTTTGAAGAAATATGATGTTTTCATCAGCTTTCGAGGCGAAGATACACGCGCTGGTTTCATAAGTCATCTATATAAAGCTTTGCGCCAACAACATATCCGTACCTACATTGACAACTTGATTGAAAAAGGAAATGAAGTTTGGGCAGAACTTGTGAAGGCAATGAAACAATCCACTTTGTTTCTTGTCGTGTTCTCGGAGAACTACGCATCTTCAACATGGTGTTTGAACGAACTAGTTCAAATAATGGAGTCTTGTAACAAAAATGAAGATGACAACGTTGTTGTTATTCCTGTGTTCTACCATGTTGACCCTTTACATGTGCGGAAGCAGACTGGTAGTTATGGCACTGCGTTGGCTACACACAAGAAGCAAGGCAACGATCATGAGATGCAAAACTGGAATACTGCTCTTTCTCAAGCTGCTAATTTGTCTGGTTTTCATTCAACCACATACAGGACTGAATCTGAATTGATTGAAGGCATTACCAGAGTTGTATTAAAAAAATTAAATCATCAGTACACAAATGAAGTTGTATCTAATTTTATACTGGATGAAAACTATTGGCACATTCATTCTTTAATAAAATTTGATTCAGCTGACGTTCAAATCATTGGACTTTGGGGCATGGAGGGCATGGGTAAGACAACTCTTGCTTCAGCTTTGTATAACAAGCTCTCTTTTCAGTATGAAGGCAAATGCTTCTTTGAAGATGCGACAGAAGTATCAAAAAAGCATGGGATAAATTACAGATTCAACAGACTTCTTTCGAAGTTATTGGGGGAAGATCTTGATATTGACACTCCAAAAGTAATACCATCCAAGATTAGGGGACGGCTCAAAAGTATGAAATCTTTCATTGTACTAGATGATGTTCATAGTTCAGAACTTCTGCAAATCATGACTGGAGGGGGACATGGTTGGCTAGGAGCTGGTAGCACAGTCGTTGTGACTACTAGGGATAGGCATGTCCTAATAAATGGAGGAATTGATAACATTTATGAAGTTGAGAATATGAAATCCCAAAATTCCCTCAAGCTTTTCTGCTTGAATGCTTTTGACACTGTCTTGCCTAAGGAGGGATTCGTGGAGCTCTCAAAAACAGTAATTGATTATGCCCAAGGCAACCCTTTAGTTCTGATAGTTTTGGGATCATCTCTTCGTTGCAAAAGTGAAATAGAATGGAATTCTGCACTAGCTAAACTGAAGAAAATTTCCAATGACAAAATTGATAGGATACTGAGATGGTGTTCTCATGGATTGGATGAATTGGATGATAACGCGGAAGATATATTTTTCGAGATTGAATACTTTTTCGAAGAAAAGGTAACGAGTGCCCTTAAGGCATTCTATAAGAGTTTATAA 1398 0.382 MVMASSSSHDASLKKYDVFISFRGEDTRAGFISHLYKALRQQHIRTYIDNLIEKGNEVWAELVKAMKQSTLFLVVFSENYASSTWCLNELVQIMESCNKNEDDNVVVIPVFYHVDPLHVRKQTGSYGTALATHKKQGNDHEMQNWNTALSQAANLSGFHSTTYRTESELIEGITRVVLKKLNHQYTNEVVSNFILDENYWHIHSLIKFDSADVQIIGLWGMEGMGKTTLASALYNKLSFQYEGKCFFEDATEVSKKHGINYRFNRLLSKLLGEDLDIDTPKVIPSKIRGRLKSMKSFIVLDDVHSSELLQIMTGGGHGWLGAGSTVVVTTRDRHVLINGGIDNIYEVENMKSQNSLKLFCLNAFDTVLPKEGFVELSKTVIDYAQGNPLVLIVLGSSLRCKSEIEWNSALAKLKKISNDKIDRILRWCSHGLDELDDNAEDIFFEIEYFFEEKVTSALKAFYKSL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04274 465 Gene3D - 349 433 IPR042197 -
Mepo1g04274 465 Pfam TIR domain 15 187 IPR000157 GO:0007165
Mepo1g04274 465 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 453 IPR044974 GO:0006952
Mepo1g04274 465 Gene3D - 185 340 IPR027417 -
Mepo1g04274 465 SMART till_3 15 155 IPR000157 GO:0007165
Mepo1g04274 465 Gene3D - 12 184 IPR035897 -
Mepo1g04274 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 434 IPR027417 -
Mepo1g04274 465 ProSiteProfiles TIR domain profile. 14 181 IPR000157 GO:0007165
Mepo1g04274 465 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 183 - -
Mepo1g04274 465 SMART AAA_5 212 351 IPR003593 GO:0016887
Mepo1g04274 465 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Mepo1g04274 465 PRINTS Disease resistance protein signature 215 230 - -
Mepo1g04274 465 PRINTS Disease resistance protein signature 384 398 - -
Mepo1g04274 465 PRINTS Disease resistance protein signature 290 304 - -
Mepo1g04274 465 Pfam NB-ARC domain 205 415 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04274 Mepo-Chr1 50138769 50141935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04274 11 450 WRKY Transcription Factor Family AT4G12020 30.995 4.25e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04274 - - mtr:25500457 658.292