Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04273 ATGACTATGGATATGGCTTCTTCTTCCTTTAACAGTGCTGCTATGAAGAAATATGATGTTTTCATCAGCTTTCGAGGCGAGGACACTCGAGTTGGTTTCACAAGCCATCTTCACGCTGCTTTGTGTCGAAGCAAGTTACATACCTACATTGACAACAGGATCGAAAAAGGAGATGAAGTTTGGGTAGAACTTGTGAAAGCAATCAAACAATCCACTCTGTTTCTTGTTGTGTTCTCCGAGAACTACGCCTCTTCAACATGGTGTTTAAACGAACTTGTTCAAATAATGGAGTGTAGCAACACAAATAAAGATGACAACGTTGTTGTTATTCCTGTGTTCTACCAAATTGACCCTTCACACGTGCGGAAGCAAACCGGGAGTTATGGCACTGCGTTGGCTAAACACAAGAAGCAAGGCAACGATCATGAGATGCAAAACTGGAATACTGCTCTTTCTCAAGCTGCTAATTTGTCTGGTTTTCATTCAACCACATACAGGACTGAATCCGACTTAAGTGAAGACATTACCAGAGCTGTATTAAGAAAATTAAATCAACAATGCGCAATTGATCTTACATGCAATTTCATACCTGATGAAAACTATAGGAGCATTCAATCTTTAATAAAATTTGACTCAACAGAAGTTCAAATCATTGGACTTTGGGGTATGGGAGGCATTGGTAAGACAACCCTTGCCACTGCTATGTTTCAAAGGGTCTCTTTCAAATATGATGGCAGTTGCTTCTTTGAAAAGGTGACAGAAGTATCAAAAAGTCATGGAATCAATTACACATGCAACAAACTTCTTTCTAAGTTACTAAAAGAAGATCTTGATATTGACACTCCCAATGTAATACCCGCCATGATTTTGAGAAGACTCAAACGCATGAAATCTTTCATTGTATTAGATGATGTACATAATTTAGAACTTTTGCAAAACTTGATTGGAGTGGAACATAGTTGGCTAGGAGCAGGTAGCACGGTAATTGTGACAACAAGGGATAAGCATGTACTAATAAGTGCAGGAATTAAGCCAATATATGAAGTTAAGAAGATGGACTCCCAACAGTCCCTACAACTTTTCTGCTTGAAGGCTTTTGACAAAGTCTTGCCTATGGAGAGATATGTAGAGCTCTCAAATAGAGCAATTGAGTATGCCAATGGAAACCCTTTAGCTTTGGAAGTTTTGGGATCATCTCTTCGTTGCAAAAGTGAAATAGAATGGAATTGTGCACTAGCTAAACTGAAGGAAATTCCCAATGCCCAAATTGATAGTATATTGAGATGGAGTTATAATGAGTTGGATGATAAAGAGAAAAATATATTTTTGGACATTGCATTCATTTTCAACGGATATGAAAGGAGTATCTTAACAAAAATATTAAATTGTTGTGGCTTCTTTGCGGTTATCGGGATTAGTCATATTTTAGACAAGGCTCTTATAAGAATTGACTTTAAAAATTGCATACAAATGCATGGCTTGATACAGGAAATGGGAAAACAAGTTGTTCGTGAAGAATCTCTTAAAAATCCCGGACAACGGAGTAGATTATGTGATCCTAAAGAAGTTTGTGATGTATTGGAAAATAATAGAGTAAGAGAATGA 1605 0.3726 MTMDMASSSFNSAAMKKYDVFISFRGEDTRVGFTSHLHAALCRSKLHTYIDNRIEKGDEVWVELVKAIKQSTLFLVVFSENYASSTWCLNELVQIMECSNTNKDDNVVVIPVFYQIDPSHVRKQTGSYGTALAKHKKQGNDHEMQNWNTALSQAANLSGFHSTTYRTESDLSEDITRAVLRKLNQQCAIDLTCNFIPDENYRSIQSLIKFDSTEVQIIGLWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSHGINYTCNKLLSKLLKEDLDIDTPNVIPAMILRRLKRMKSFIVLDDVHNLELLQNLIGVEHSWLGAGSTVIVTTRDKHVLISAGIKPIYEVKKMDSQQSLQLFCLKAFDKVLPMERYVELSNRAIEYANGNPLALEVLGSSLRCKSEIEWNCALAKLKEIPNAQIDSILRWSYNELDDKEKNIFLDIAFIFNGYERSILTKILNCCGFFAVIGISHILDKALIRIDFKNCIQMHGLIQEMGKQVVREESLKNPGQRSRLCDPKEVCDVLENNRVRE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04273 534 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Mepo1g04273 534 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Mepo1g04273 534 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 528 IPR044974 GO:0006952
Mepo1g04273 534 Gene3D - 195 344 IPR027417 -
Mepo1g04273 534 Pfam NB-ARC domain 204 434 IPR002182 GO:0043531
Mepo1g04273 534 Gene3D - 351 435 IPR042197 -
Mepo1g04273 534 Gene3D - 14 189 IPR035897 -
Mepo1g04273 534 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Mepo1g04273 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 445 IPR027417 -
Mepo1g04273 534 SMART till_3 17 157 IPR000157 GO:0007165
Mepo1g04273 534 PRINTS Disease resistance protein signature 386 400 - -
Mepo1g04273 534 PRINTS Disease resistance protein signature 217 232 - -
Mepo1g04273 534 PRINTS Disease resistance protein signature 292 306 - -
Mepo1g04273 534 Pfam TIR domain 17 186 IPR000157 GO:0007165
Mepo1g04273 534 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04273 Mepo-Chr1 50110373 50128770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04273 13 517 WRKY Transcription Factor Family AT4G12020 31.164 2.74e-63 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04273 - - mtr:25500457 862.062